Mercurial > repos > bgruening > hicexplorer_hicaverageregions
comparison hicAverageRegions.xml @ 7:b15d27c440fd draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
| author | iuc |
|---|---|
| date | Tue, 10 Jan 2023 19:09:18 +0000 |
| parents | 03d7978293fe |
| children | c72fa6cb8817 |
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| 6:03d7978293fe | 7:b15d27c440fd |
|---|---|
| 49 <data name="outFileName" from_work_dir="output_matrix.npz" format="zip" /> | 49 <data name="outFileName" from_work_dir="output_matrix.npz" format="zip" /> |
| 50 </outputs> | 50 </outputs> |
| 51 <tests> | 51 <tests> |
| 52 <test> | 52 <test> |
| 53 <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> | 53 <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> |
| 54 <param name="regions" value="hicAverageRegions/regions.bed" /> | 54 <param name="regions" value="hicAverageRegions/regions.bed" ftype="bed"/> |
| 55 <conditional name="rangeFormat_conditional"> | 55 <conditional name="rangeFormat_conditional"> |
| 56 <param name="rangeFormat_selector" value='optionGenomicUnits' /> | 56 <param name="rangeFormat_selector" value='optionGenomicUnits' /> |
| 57 <param name="upstreamRange" value='100000' /> | 57 <param name="upstreamRange" value='100000' /> |
| 58 <param name="downstreamRange" value='100000' /> | 58 <param name="downstreamRange" value='100000' /> |
| 59 </conditional> | 59 </conditional> |
| 60 <output name='outFileName' file='hicAverageRegions/result_range_100000.npz' ftype="zip" compare="sim_size" delta="20000" /> | 60 <output name='outFileName' file='hicAverageRegions/result_range_100000.npz' ftype="zip" compare="sim_size" delta="20000" /> |
| 61 </test> | 61 </test> |
| 62 <test> | 62 <test> |
| 63 <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> | 63 <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> |
| 64 <param name="regions" value="hicAverageRegions/regions.bed" /> | 64 <param name="regions" value="hicAverageRegions/regions.bed" ftype="bed" /> |
| 65 <conditional name="rangeFormat_conditional"> | 65 <conditional name="rangeFormat_conditional"> |
| 66 <param name="rangeFormat_selector" value='optionBinUnits' /> | 66 <param name="rangeFormat_selector" value='optionBinUnits' /> |
| 67 <param name="upstreamRange" value='100' /> | 67 <param name="upstreamRange" value='100' /> |
| 68 <param name="downstreamRange" value='100' /> | 68 <param name="downstreamRange" value='100' /> |
| 69 </conditional> | 69 </conditional> |