Mercurial > repos > bgruening > hicexplorer_hicaverageregions
changeset 7:b15d27c440fd draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
| author | iuc |
|---|---|
| date | Tue, 10 Jan 2023 19:09:18 +0000 |
| parents | 03d7978293fe |
| children | c72fa6cb8817 |
| files | hicAverageRegions.xml macros.xml |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/hicAverageRegions.xml Tue Mar 16 14:57:51 2021 +0000 +++ b/hicAverageRegions.xml Tue Jan 10 19:09:18 2023 +0000 @@ -51,7 +51,7 @@ <tests> <test> <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> - <param name="regions" value="hicAverageRegions/regions.bed" /> + <param name="regions" value="hicAverageRegions/regions.bed" ftype="bed"/> <conditional name="rangeFormat_conditional"> <param name="rangeFormat_selector" value='optionGenomicUnits' /> <param name="upstreamRange" value='100000' /> @@ -61,7 +61,7 @@ </test> <test> <param name="matrix_h5_cooler" value="small_test_matrix.cool" /> - <param name="regions" value="hicAverageRegions/regions.bed" /> + <param name="regions" value="hicAverageRegions/regions.bed" ftype="bed" /> <conditional name="rangeFormat_conditional"> <param name="rangeFormat_selector" value='optionBinUnits' /> <param name="upstreamRange" value='100' />
--- a/macros.xml Tue Mar 16 14:57:51 2021 +0000 +++ b/macros.xml Tue Jan 10 19:09:18 2023 +0000 @@ -1,7 +1,7 @@ <macros> <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token> <token name="@TOOL_VERSION@">3.6</token> - <token name="@VERSION_SUFFIX@">0</token> + <token name="@VERSION_SUFFIX@">1</token> <token name="@USE_RANGE@"> #if $use_range.select_use_range == "yes_use_range": --range $use_range.range_min:$use_range.range_max @@ -333,7 +333,7 @@ <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" /> </xml> <xml name="xMax"> - <param argument="--xMax" name="xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" /> + <param argument="--xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" /> </xml> <xml name="filterThreshold"> <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." />