Mercurial > repos > bgruening > hicexplorer_hiccompartmentspolarization

diff hicCompartmentalization.xml @ 7:bd6e26c47853 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
author iuc
date Tue, 10 Jan 2023 18:48:44 +0000
parents ed3dea19c464
children 3a6a5381db36
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--- a/hicCompartmentalization.xml	Tue Mar 16 14:56:24 2021 +0000
+++ b/hicCompartmentalization.xml	Tue Jan 10 18:48:44 2023 +0000
@@ -58,18 +58,18 @@
     <tests>
         <test>
             <param name="matrix_h5_cooler_multiple" value="hicTransform/obs_exp_norm.h5" />
-            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" />
+            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" ftype="bedgraph" />
             <output name="outFileName" file="hicCompartmentsPolarization/compartmentsPolarizationRatio.png" ftype="png" compare="sim_size" />
         </test>
         <test>
             <param name="matrix_h5_cooler_multiple" value="hicTransform/obs_exp_norm.h5" />
-            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" />
+            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" ftype="bedgraph" />
             <param name="quantile" value='30' />
             <output name="outFileName" file="hicCompartmentsPolarization/compartmentsPolarizationRatio.png" ftype="png" compare="sim_size" />
         </test>
         <test>
             <param name="matrix_h5_cooler_multiple" value="hicTransform/obs_exp_norm.h5" />
-            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" />
+            <param name="pca" value="hicCompartmentsPolarization/pca1.bedgraph" ftype="bedgraph" />
             <param name="outliers" value='1.0' />
             <output name="outFileName" file="hicCompartmentsPolarization/compartmentsPolarizationRatio.png" ftype="png" compare="sim_size" />
         </test>