Mercurial > repos > bgruening > hicexplorer_hichyperoptdetectloops

annotate test-data/hicValidateLocations/overlap_smc3_statistics @ 3:409396ea5cf0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
author iuc
date Mon, 01 Jul 2024 20:02:17 +0000
parents 7f7c6ead2d0d
children 3e5c86c2f80d
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409396ea5cf0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
iuc
parents: 2
diff changeset
1 # HiCExplorer hicValidateLocations 3.7.5
409396ea5cf0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
iuc
parents: 2
diff changeset
2 # Overlap of loop file /tmp/tmpjkr0wi60/files/a/f/1/dataset_af1f91e3-b1bd-4c1c-8842-935caae86bf2.dat with protein file /tmp/tmpjkr0wi60/files/e/6/e/dataset_e6e4503d-c6a1-4370-bc34-70b2fae3fc95.dat
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dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
parents:
diff changeset
3 #
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
parents:
diff changeset
4 Protein peaks: 3097
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
parents:
diff changeset
5 Matched Loops: 530
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
parents:
diff changeset
6 Total Loops: 1007
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
parents:
diff changeset
7 Loops match protein: 0.5263157894736842