view test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 17:03dd3c16ae4e draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
author iuc
date Tue, 16 Mar 2021 15:09:57 +0000
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
# This file contains the p-values computed by chi2 test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 673.0
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 832.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	14274000	14279000	Eya1	-22000	673.00000	7.00000	832.00000	0.00000		0.00335
chr1	14290000	14439000	Eya1	138000	673.00000	523.00000	832.00000	645.00000		0.97540
chr1	14444000	14467000	Eya1	166000	673.00000	10.00000	832.00000	25.00000		0.05733
chr1	14476000	14501000	Eya1	200000	673.00000	30.25000	832.00000	26.15000		0.18635