annotate test-data/test_2.json @ 1:891283e0ee89 draft default tip

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pharmcat commit dddf99b20ed9b07334505917f362785e3dace3b9"

{
  "metadata": {
    "namedAlleleMatcherVersion": "1.0.0",
    "genomeBuild": "GRCh38.p13",
    "inputFilename": "input.vcf",
    "timestamp": "May 4, 2022, 8:57:03 PM"
  },
  "results": [
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr4",
      "gene": "ABCG2",
      "diplotypes": [],
      "haplotypes": [],
      "phased": true,
      "variants": [],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [
          {
            "chromosome": "chr4",
            "position": 88131171,
            "cpicPosition": 88131171,
            "rsid": "rs2231142",
            "chromosomeHgvsName": "g.88131171G\u003eT",
            "cpicAlleles": [
              "G",
              "T"
            ],
            "cpicToVcfAlleleMap": {
              "T": "T",
              "G": "G"
            },
            "ref": "G",
            "alts": [
              "T"
            ]
          }
        ],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [
        "rs2231142 variant (T)",
        "rs2231142 reference (G)"
      ],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr1",
      "gene": "CACNA1S",
      "diplotypes": [
        {
          "name": "Reference/Reference",
          "haplotype1": {
            "name": "Reference",
            "sequences": [
              "201060815:C;201091993:G;"
            ]
          },
          "haplotype2": {
            "name": "Reference",
            "sequences": [
              "201060815:C;201091993:G;"
            ]
          },
          "score": 4
        }
      ],
      "haplotypes": [
        {
          "name": "Reference",
          "sequences": [
            "201060815:C;201091993:G;"
          ]
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      "phased": true,
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        {
          "position": 201060815,
          "rsid": "rs1800559",
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        {
          "position": 201091993,
          "rsid": "rs772226819",
          "vcfCall": "G|G"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
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      },
      "uncallableHaplotypes": [],
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    },
    {
      "alleleDefinitionVersion": "04/20/22",
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      "diplotypes": [
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          "name": "ivacaftor non-responsive CFTR sequence/ivacaftor non-responsive CFTR sequence",
          "haplotype1": {
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            "sequences": [
              "117509035:G;117509069:C;117509089:C;117530953:G;117530955:C;117530974:C;117530975:G;117534318:G;117534363:G;117534368:A;117535285:T;117540270:G;117540285:G;117548795:C;117587799:A;117587800:G;117587801:T;117587805:G;117587806:G;117590409:A;117594930:G;117602868:G;117603708:C;117606695:C;117611555:A;117611595:T;117611620:A;117611640:G;117611646:G;117611649:C;117611650:G;117611663:T;117614699:G;117639961:C;117642451:G;117642472:G;117642483:T;117642528:G;117664770:G;"
            ]
          },
          "haplotype2": {
            "name": "ivacaftor non-responsive CFTR sequence",
            "sequences": [
              "117509035:G;117509069:C;117509089:C;117530953:G;117530955:C;117530974:C;117530975:G;117534318:G;117534363:G;117534368:A;117535285:T;117540270:G;117540285:G;117548795:C;117587799:A;117587800:G;117587801:T;117587805:G;117587806:G;117590409:A;117594930:G;117602868:G;117603708:C;117606695:C;117611555:A;117611595:T;117611620:A;117611640:G;117611646:G;117611649:C;117611650:G;117611663:T;117614699:G;117639961:C;117642451:G;117642472:G;117642483:T;117642528:G;117664770:G;"
            ]
          },
          "score": 78
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      ],
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            "117509035:G;117509069:C;117509089:C;117530953:G;117530955:C;117530974:C;117530975:G;117534318:G;117534363:G;117534368:A;117535285:T;117540270:G;117540285:G;117548795:C;117587799:A;117587800:G;117587801:T;117587805:G;117587806:G;117590409:A;117594930:G;117602868:G;117603708:C;117606695:C;117611555:A;117611595:T;117611620:A;117611640:G;117611646:G;117611649:C;117611650:G;117611663:T;117614699:G;117639961:C;117642451:G;117642472:G;117642483:T;117642528:G;117664770:G;"
          ]
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        {
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        {
          "position": 117530974,
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        {
          "position": 117530975,
          "rsid": "rs78655421",
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        {
          "position": 117534318,
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        {
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          "position": 117535285,
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        {
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        {
          "position": 117548795,
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        {
          "position": 117587799,
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          "position": 117587800,
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        {
          "position": 117587801,
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        {
          "position": 117587805,
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        {
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        {
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          "position": 117603708,
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        {
          "position": 117606695,
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          "position": 117664770,
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    },
    {
      "alleleDefinitionVersion": "04/20/22",
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      "gene": "CYP2B6",
      "diplotypes": [
        {
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          "haplotype1": {
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              "40991224:T;40991367:A;40991369:C;40991381:A;40991388:A;40991390:C;40991391:G;40991441:A;41004015:T;41004125:G;41004158:G;41004303:T;41004377:A;41004381:G;41004406:G;41006919:C;41006923:C;41006936:G;41006968:T;41007013:T;41009350:C;41009358:A;41010006:G;41010088:C;41010108:C;41012316:T;41012339:C;41012465:C;41012693:T;41012740:G;41012803:C;41016726:A;41016778:G;41016805:A;41016810:C;"
            ]
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              "40991224:T;40991367:A;40991369:C;40991381:A;40991388:A;40991390:C;40991391:G;40991441:A;41004015:T;41004125:G;41004158:G;41004303:T;41004377:A;41004381:G;41004406:G;41006919:C;41006923:C;41006936:G;41006968:T;41007013:T;41009350:C;41009358:A;41010006:G;41010088:C;41010108:C;41012316:T;41012339:C;41012465:C;41012693:T;41012740:G;41012803:C;41016726:A;41016778:G;41016805:A;41016810:C;"
            ]
          },
          "score": 70
        }
      ],
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        {
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          "sequences": [
            "40991224:T;40991367:A;40991369:C;40991381:A;40991388:A;40991390:C;40991391:G;40991441:A;41004015:T;41004125:G;41004158:G;41004303:T;41004377:A;41004381:G;41004406:G;41006919:C;41006923:C;41006936:G;41006968:T;41007013:T;41009350:C;41009358:A;41010006:G;41010088:C;41010108:C;41012316:T;41012339:C;41012465:C;41012693:T;41012740:G;41012803:C;41016726:A;41016778:G;41016805:A;41016810:C;"
          ]
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      ],
      "phased": true,
      "variants": [
        {
          "position": 40991224,
          "rsid": "rs34223104",
          "vcfCall": "T|T"
        },
        {
          "position": 40991367,
          "rsid": "rs34883432",
          "vcfCall": "A|A"
        },
        {
          "position": 40991369,
          "rsid": "rs8192709",
          "vcfCall": "C|C"
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        {
          "position": 40991381,
          "rsid": "rs33973337",
          "vcfCall": "A|A"
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          "position": 40991388,
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          "vcfCall": "A|A"
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        {
          "position": 40991390,
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        {
          "position": 40991391,
          "rsid": "rs34284776",
          "vcfCall": "G|G"
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        {
          "position": 40991441,
          "rsid": "rs35303484",
          "vcfCall": "A|A"
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        {
          "position": 41004015,
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          "vcfCall": "T|T"
        },
        {
          "position": 41004125,
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        },
        {
          "position": 41004158,
          "rsid": "rs186335453",
          "vcfCall": "G|G"
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        {
          "position": 41004303,
          "rsid": "rs139801276",
          "vcfCall": "T|T"
        },
        {
          "position": 41004377,
          "rsid": "rs12721655",
          "vcfCall": "A|A"
        },
        {
          "position": 41004381,
          "rsid": "rs35773040",
          "vcfCall": "G|G"
        },
        {
          "position": 41004406,
          "rsid": "rs145884402",
          "vcfCall": "G|G"
        },
        {
          "position": 41006919,
          "rsid": "rs3826711",
          "vcfCall": "C|C"
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        {
          "position": 41006923,
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          "vcfCall": "C|C"
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        {
          "position": 41006936,
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          "vcfCall": "G|G"
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        {
          "position": 41006968,
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          "vcfCall": "T|T"
        },
        {
          "position": 41007013,
          "rsid": "rs36079186",
          "vcfCall": "T|T"
        },
        {
          "position": 41009350,
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        {
          "position": 41009358,
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          "vcfCall": "A|A"
        },
        {
          "position": 41010006,
          "rsid": "rs139029625",
          "vcfCall": "G|G"
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        {
          "position": 41010088,
          "rsid": "rs34698757",
          "vcfCall": "C|C"
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        {
          "position": 41010108,
          "rsid": "rs193922917",
          "vcfCall": "C|C"
        },
        {
          "position": 41012316,
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        {
          "position": 41012339,
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        {
          "position": 41012465,
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        {
          "position": 41012693,
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        {
          "position": 41012740,
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          "vcfCall": "G|G"
        },
        {
          "position": 41012803,
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        {
          "position": 41016726,
          "rsid": "rs3211369",
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        {
          "position": 41016778,
          "rsid": "rs564083989",
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        {
          "position": 41016805,
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        },
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          "position": 41016810,
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      ],
      "variantsOfInterest": [],
      "matchData": {
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        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr10",
      "gene": "CYP2C19",
      "diplotypes": [
        {
          "name": "*38/*38",
          "haplotype1": {
            "name": "*38",
            "sequences": [
              "94761900:C;94762706:A;94762712:C;94762715:T;94762755:T;94762760:A;94762788:A;94762856:A;94775106:C;94775121:C;94775160:G;94775185:A;94775367:A;94775416:T;94775423:A;94775453:G;94775489:G;94775507:G;94780574:G;94780579:G;94780653:G;94781858:C;94781859:G;94781944:G;94781999:T;94842861:G;94842866:A;94842879:G;94842995:G;94849995:C;94852738:C;94852765:C;94852785:C;94852914:A;"
            ]
          },
          "haplotype2": {
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              "94761900:C;94762706:A;94762712:C;94762715:T;94762755:T;94762760:A;94762788:A;94762856:A;94775106:C;94775121:C;94775160:G;94775185:A;94775367:A;94775416:T;94775423:A;94775453:G;94775489:G;94775507:G;94780574:G;94780579:G;94780653:G;94781858:C;94781859:G;94781944:G;94781999:T;94842861:G;94842866:A;94842879:G;94842995:G;94849995:C;94852738:C;94852765:C;94852785:C;94852914:A;"
            ]
          },
          "score": 68
        }
      ],
      "haplotypes": [
        {
          "name": "*38",
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            "94761900:C;94762706:A;94762712:C;94762715:T;94762755:T;94762760:A;94762788:A;94762856:A;94775106:C;94775121:C;94775160:G;94775185:A;94775367:A;94775416:T;94775423:A;94775453:G;94775489:G;94775507:G;94780574:G;94780579:G;94780653:G;94781858:C;94781859:G;94781944:G;94781999:T;94842861:G;94842866:A;94842879:G;94842995:G;94849995:C;94852738:C;94852765:C;94852785:C;94852914:A;"
          ]
        }
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        {
          "position": 94761900,
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        {
          "position": 94762706,
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        {
          "position": 94762712,
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          "vcfCall": "C|C"
        },
        {
          "position": 94762715,
          "rsid": "rs367543003",
          "vcfCall": "T|T"
        },
        {
          "position": 94762755,
          "rsid": "rs55752064",
          "vcfCall": "T|T"
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        {
          "position": 94762760,
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        {
          "position": 94762788,
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        {
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        {
          "position": 94775106,
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          "vcfCall": "C|C"
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        {
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          "vcfCall": "C|C"
        },
        {
          "position": 94775160,
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          "vcfCall": "G|G"
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        {
          "position": 94775185,
          "rsid": "rs1288601658",
          "vcfCall": "A|A"
        },
        {
          "position": 94775367,
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          "vcfCall": "A|A"
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        {
          "position": 94775416,
          "rsid": "rs41291556",
          "vcfCall": "T|T"
        },
        {
          "position": 94775423,
          "rsid": "rs17885179",
          "vcfCall": "A|A"
        },
        {
          "position": 94775453,
          "rsid": "rs72552267",
          "vcfCall": "G|G"
        },
        {
          "position": 94775489,
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          "vcfCall": "G|G"
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        {
          "position": 94775507,
          "rsid": "rs58973490",
          "vcfCall": "G|G"
        },
        {
          "position": 94780574,
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          "vcfCall": "G|G"
        },
        {
          "position": 94780579,
          "rsid": "rs370803989",
          "vcfCall": "G|G"
        },
        {
          "position": 94780653,
          "rsid": "rs4986893",
          "vcfCall": "G|G"
        },
        {
          "position": 94781858,
          "rsid": "rs6413438",
          "vcfCall": "C|C"
        },
        {
          "position": 94781859,
          "rsid": "rs4244285",
          "vcfCall": "G|G"
        },
        {
          "position": 94781944,
          "rsid": "rs375781227",
          "vcfCall": "G|G"
        },
        {
          "position": 94781999,
          "rsid": "rs72558186",
          "vcfCall": "T|T"
        },
        {
          "position": 94842861,
          "rsid": "rs138142612",
          "vcfCall": "G|G"
        },
        {
          "position": 94842866,
          "rsid": "rs3758581",
          "vcfCall": "A|A"
        },
        {
          "position": 94842879,
          "rsid": "rs118203757",
          "vcfCall": "G|G"
        },
        {
          "position": 94842995,
          "rsid": "rs113934938",
          "vcfCall": "G|G"
        },
        {
          "position": 94849995,
          "rsid": "rs17879685",
          "vcfCall": "C|C"
        },
        {
          "position": 94852738,
          "rsid": "rs56337013",
          "vcfCall": "C|C"
        },
        {
          "position": 94852765,
          "rsid": "rs192154563",
          "vcfCall": "C|C"
        },
        {
          "position": 94852785,
          "rsid": "rs118203759",
          "vcfCall": "C|C"
        },
        {
          "position": 94852914,
          "rsid": "rs55640102",
          "vcfCall": "A|A"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr10",
      "gene": "CYP2C9",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "94938683:A;94938737:C;94938771:C;94938803:A;94938828:A;94941897:G;94941915:G;94941958:T;94941976:G;94941982:G;94942018:T;94942205:CAATGGAAAGA;94942216:A;94942230:C;94942231:G;94942233:C;94942234:G;94942249:C;94942254:C;94942255:G;94942290:C;94942291:G;94942305:G;94942309:G;94947782:C;94947785:C;94947869:A;94947907:A;94947917:T;94947938:A;94949129:A;94949144:C;94949217:A;94949280:A;94949281:GA;94972119:C;94972123:C;94972134:A;94972179:A;94972180:C;94972233:C;94981199:G;94981201:T;94981224:C;94981225:G;94981230:C;94981250:C;94981281:G;94981296:A;94981297:T;94981301:C;94981302:C;94981305:C;94981365:C;94981371:G;94986042:A;94986073:A;94988852:C;94988855:A;94988880:G;94988917:G;94988925:A;94988955:T;94988984:G;94989020:C;94989023:G;"
            ]
          },
          "haplotype2": {
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              "94938683:A;94938737:C;94938771:C;94938803:A;94938828:A;94941897:G;94941915:G;94941958:T;94941976:G;94941982:G;94942018:T;94942205:CAATGGAAAGA;94942216:A;94942230:C;94942231:G;94942233:C;94942234:G;94942249:C;94942254:C;94942255:G;94942290:C;94942291:G;94942305:G;94942309:G;94947782:C;94947785:C;94947869:A;94947907:A;94947917:T;94947938:A;94949129:A;94949144:C;94949217:A;94949280:A;94949281:GA;94972119:C;94972123:C;94972134:A;94972179:A;94972180:C;94972233:C;94981199:G;94981201:T;94981224:C;94981225:G;94981230:C;94981250:C;94981281:G;94981296:A;94981297:T;94981301:C;94981302:C;94981305:C;94981365:C;94981371:G;94986042:A;94986073:A;94988852:C;94988855:A;94988880:G;94988917:G;94988925:A;94988955:T;94988984:G;94989020:C;94989023:G;"
            ]
          },
          "score": 132
        }
      ],
      "haplotypes": [
        {
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            "94938683:A;94938737:C;94938771:C;94938803:A;94938828:A;94941897:G;94941915:G;94941958:T;94941976:G;94941982:G;94942018:T;94942205:CAATGGAAAGA;94942216:A;94942230:C;94942231:G;94942233:C;94942234:G;94942249:C;94942254:C;94942255:G;94942290:C;94942291:G;94942305:G;94942309:G;94947782:C;94947785:C;94947869:A;94947907:A;94947917:T;94947938:A;94949129:A;94949144:C;94949217:A;94949280:A;94949281:GA;94972119:C;94972123:C;94972134:A;94972179:A;94972180:C;94972233:C;94981199:G;94981201:T;94981224:C;94981225:G;94981230:C;94981250:C;94981281:G;94981296:A;94981297:T;94981301:C;94981302:C;94981305:C;94981365:C;94981371:G;94986042:A;94986073:A;94988852:C;94988855:A;94988880:G;94988917:G;94988925:A;94988955:T;94988984:G;94989020:C;94989023:G;"
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          "position": 94938683,
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        {
          "position": 94938737,
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          "position": 94938803,
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        {
          "position": 94938828,
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        {
          "position": 94941958,
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        {
          "position": 94941976,
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        {
          "position": 94941982,
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        {
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        {
          "position": 94942230,
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      "variantsOfInterest": [
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      ],
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          {
            "chromosome": "chr10",
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          {
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          {
            "chromosome": "chr10",
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          {
            "chromosome": "chr10",
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          {
            "chromosome": "chr10",
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            "cpicPosition": 94981258,
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          },
          {
            "chromosome": "chr10",
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            "cpicPosition": 94986136,
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            "ref": "A",
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          },
          {
            "chromosome": "chr10",
            "position": 94986174,
            "cpicPosition": 94986174,
            "rsid": "rs1441296358",
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            "cpicToVcfAlleleMap": {
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        ],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [
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        "*72",
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      ],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr7",
      "gene": "CYP3A5",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "99652770:T;99660516:C;99665212:C;99672916:T;99676198:G;"
            ]
          },
          "haplotype2": {
            "name": "*1",
            "sequences": [
              "99652770:T;99660516:C;99665212:C;99672916:T;99676198:G;"
            ]
          },
          "score": 10
        }
      ],
      "haplotypes": [
        {
          "name": "*1",
          "sequences": [
            "99652770:T;99660516:C;99665212:C;99672916:T;99676198:G;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 99652770,
          "rsid": "rs41303343",
          "vcfCall": "T|T"
        },
        {
          "position": 99660516,
          "rsid": "rs28383479",
          "vcfCall": "C|C"
        },
        {
          "position": 99665212,
          "rsid": "rs10264272",
          "vcfCall": "C|C"
        },
        {
          "position": 99672916,
          "rsid": "rs776746",
          "vcfCall": "T|T"
        },
        {
          "position": 99676198,
          "rsid": "rs55817950",
          "vcfCall": "G|G"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr19",
      "gene": "CYP4F2",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "15879621:C;15897578:A;"
            ]
          },
          "haplotype2": {
            "name": "*1",
            "sequences": [
              "15879621:C;15897578:A;"
            ]
          },
          "score": 4
        }
      ],
      "haplotypes": [
        {
          "name": "*1",
          "sequences": [
            "15879621:C;15897578:A;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 15879621,
          "rsid": "rs2108622",
          "vcfCall": "C|C"
        },
        {
          "position": 15897578,
          "rsid": "rs3093105",
          "vcfCall": "A|A"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr1",
      "gene": "DPYD",
      "diplotypes": [
        {
          "name": "Reference/Reference",
          "haplotype1": {
            "name": "Reference",
            "sequences": [
              "97078987:G;97078993:C;97079005:C;97079071:C;97079076:A;97079077:G;97079121:T;97079133:T;97079139:T;97082365:T;97082391:T;97098598:C;97098599:G;97098616:C;97098632:T;97193109:T;97193209:C;97234958:G;97234991:G;97305279:G;97305363:A;97305364:C;97305372:G;97306195:C;97373598:C;97373629:C;97382461:T;97450058:C;97450059:G;97450065:TG;97450068:A;97450168:A;97450187:C;97450189:C;97450190:G;97515784:C;97515787:A;97515839:T;97515851:C;97515865:C;97515889:G;97515923:C;97549565:C;97549600:T;97549609:G;97549681:G;97549713:G;97549726:G;97549735:G;97573785:A;97573805:C;97573821:C;97573839:A;97573863:C;97573881:C;97573918:C;97573919:G;97573943:C;97579893:G;97593238:T;97593289:G;97593322:C;97593343:C;97593379:C;97595083:G;97595088:A;97595149:T;97679170:T;97691776:G;97699399:T;97699430:T;97699474:T;97699506:C;97699533:C;97699535:T;97721542:T;97721650:T;97740400:C;97740410:GATGA;97883329:A;97883352:C;97883353:G;97883368:G;"
            ]
          },
          "haplotype2": {
            "name": "Reference",
            "sequences": [
              "97078987:G;97078993:C;97079005:C;97079071:C;97079076:A;97079077:G;97079121:T;97079133:T;97079139:T;97082365:T;97082391:T;97098598:C;97098599:G;97098616:C;97098632:T;97193109:T;97193209:C;97234958:G;97234991:G;97305279:G;97305363:A;97305364:C;97305372:G;97306195:C;97373598:C;97373629:C;97382461:T;97450058:C;97450059:G;97450065:TG;97450068:A;97450168:A;97450187:C;97450189:C;97450190:G;97515784:C;97515787:A;97515839:T;97515851:C;97515865:C;97515889:G;97515923:C;97549565:C;97549600:T;97549609:G;97549681:G;97549713:G;97549726:G;97549735:G;97573785:A;97573805:C;97573821:C;97573839:A;97573863:C;97573881:C;97573918:C;97573919:G;97573943:C;97579893:G;97593238:T;97593289:G;97593322:C;97593343:C;97593379:C;97595083:G;97595088:A;97595149:T;97679170:T;97691776:G;97699399:T;97699430:T;97699474:T;97699506:C;97699533:C;97699535:T;97721542:T;97721650:T;97740400:C;97740410:GATGA;97883329:A;97883352:C;97883353:G;97883368:G;"
            ]
          },
          "score": 166
        }
      ],
      "haplotypes": [
        {
          "name": "Reference",
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            "97078987:G;97078993:C;97079005:C;97079071:C;97079076:A;97079077:G;97079121:T;97079133:T;97079139:T;97082365:T;97082391:T;97098598:C;97098599:G;97098616:C;97098632:T;97193109:T;97193209:C;97234958:G;97234991:G;97305279:G;97305363:A;97305364:C;97305372:G;97306195:C;97373598:C;97373629:C;97382461:T;97450058:C;97450059:G;97450065:TG;97450068:A;97450168:A;97450187:C;97450189:C;97450190:G;97515784:C;97515787:A;97515839:T;97515851:C;97515865:C;97515889:G;97515923:C;97549565:C;97549600:T;97549609:G;97549681:G;97549713:G;97549726:G;97549735:G;97573785:A;97573805:C;97573821:C;97573839:A;97573863:C;97573881:C;97573918:C;97573919:G;97573943:C;97579893:G;97593238:T;97593289:G;97593322:C;97593343:C;97593379:C;97595083:G;97595088:A;97595149:T;97679170:T;97691776:G;97699399:T;97699430:T;97699474:T;97699506:C;97699533:C;97699535:T;97721542:T;97721650:T;97740400:C;97740410:GATGA;97883329:A;97883352:C;97883353:G;97883368:G;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 97078987,
          "rsid": "rs114096998",
          "vcfCall": "G|G"
        },
        {
          "position": 97078993,
          "rsid": "rs148799944",
          "vcfCall": "C|C"
        },
        {
          "position": 97079005,
          "rsid": "rs140114515",
          "vcfCall": "C|C"
        },
        {
          "position": 97079071,
          "rsid": "rs1801268",
          "vcfCall": "C|C"
        },
        {
          "position": 97079076,
          "rsid": "rs139459586",
          "vcfCall": "A|A"
        },
        {
          "position": 97079077,
          "rsid": "rs202144771",
          "vcfCall": "G|G"
        },
        {
          "position": 97079121,
          "rsid": "rs72547601",
          "vcfCall": "T|T"
        },
        {
          "position": 97079133,
          "rsid": "rs72547602",
          "vcfCall": "T|T"
        },
        {
          "position": 97079139,
          "rsid": "rs145529148",
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        },
        {
          "position": 97082365,
          "rsid": "rs141044036",
          "vcfCall": "T|T"
        },
        {
          "position": 97082391,
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        },
        {
          "position": 97098598,
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        },
        {
          "position": 97098599,
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        {
          "position": 97098616,
          "rsid": "rs55674432",
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        },
        {
          "position": 97098632,
          "rsid": "rs201035051",
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        },
        {
          "position": 97193109,
          "rsid": "rs60139309",
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        },
        {
          "position": 97193209,
          "rsid": "rs200687447",
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        },
        {
          "position": 97234958,
          "rsid": "rs199634007",
          "vcfCall": "G|G"
        },
        {
          "position": 97234991,
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        },
        {
          "position": 97305279,
          "rsid": "rs112766203",
          "vcfCall": "G|G"
        },
        {
          "position": 97305363,
          "rsid": "rs60511679",
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        {
          "position": 97305364,
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        },
        {
          "position": 97305372,
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          "vcfCall": "G|G"
        },
        {
          "position": 97306195,
          "rsid": "rs145548112",
          "vcfCall": "C|C"
        },
        {
          "position": 97373598,
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          "vcfCall": "C|C"
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        {
          "position": 97373629,
          "rsid": "rs138545885",
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        {
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          "rsid": "rs55971861",
          "vcfCall": "T|T"
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        {
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          "vcfCall": "C|C"
        },
        {
          "position": 97450059,
          "rsid": "rs3918289",
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        },
        {
          "position": 97450065,
          "rsid": "rs72549303",
          "vcfCall": "TG|TG"
        },
        {
          "position": 97450068,
          "rsid": "rs17376848",
          "vcfCall": "A|A"
        },
        {
          "position": 97450168,
          "rsid": "rs147601618",
          "vcfCall": "A|A"
        },
        {
          "position": 97450187,
          "rsid": "rs145773863",
          "vcfCall": "C|C"
        },
        {
          "position": 97450189,
          "rsid": "rs138616379",
          "vcfCall": "C|C"
        },
        {
          "position": 97450190,
          "rsid": "rs59086055",
          "vcfCall": "G|G"
        },
        {
          "position": 97515784,
          "rsid": "rs201615754",
          "vcfCall": "C|C"
        },
        {
          "position": 97515787,
          "rsid": "rs55886062",
          "vcfCall": "A|A"
        },
        {
          "position": 97515839,
          "rsid": "rs1801159",
          "vcfCall": "T|T"
        },
        {
          "position": 97515851,
          "rsid": "rs142619737",
          "vcfCall": "C|C"
        },
        {
          "position": 97515865,
          "rsid": "rs1801158",
          "vcfCall": "C|C"
        },
        {
          "position": 97515889,
          "rsid": "rs190951787",
          "vcfCall": "G|G"
        },
        {
          "position": 97515923,
          "rsid": "rs148994843",
          "vcfCall": "C|C"
        },
        {
          "position": 97549565,
          "rsid": "rs138391898",
          "vcfCall": "C|C"
        },
        {
          "position": 97549600,
          "rsid": "rs111858276",
          "vcfCall": "T|T"
        },
        {
          "position": 97549609,
          "rsid": "rs72549304",
          "vcfCall": "G|G"
        },
        {
          "position": 97549681,
          "rsid": "rs199549923",
          "vcfCall": "G|G"
        },
        {
          "position": 97549713,
          "rsid": "rs57918000",
          "vcfCall": "G|G"
        },
        {
          "position": 97549726,
          "rsid": "rs144395748",
          "vcfCall": "G|G"
        },
        {
          "position": 97549735,
          "rsid": "rs72975710",
          "vcfCall": "G|G"
        },
        {
          "position": 97573785,
          "rsid": "rs186169810",
          "vcfCall": "A|A"
        },
        {
          "position": 97573805,
          "rsid": "rs142512579",
          "vcfCall": "C|C"
        },
        {
          "position": 97573821,
          "rsid": "rs764666241",
          "vcfCall": "C|C"
        },
        {
          "position": 97573839,
          "rsid": "rs200064537",
          "vcfCall": "A|A"
        },
        {
          "position": 97573863,
          "rsid": "rs56038477",
          "vcfCall": "C|C"
        },
        {
          "position": 97573881,
          "rsid": "rs61622928",
          "vcfCall": "C|C"
        },
        {
          "position": 97573918,
          "rsid": "rs143815742",
          "vcfCall": "C|C"
        },
        {
          "position": 97573919,
          "rsid": "rs140602333",
          "vcfCall": "G|G"
        },
        {
          "position": 97573943,
          "rsid": "rs78060119",
          "vcfCall": "C|C"
        },
        {
          "position": 97579893,
          "rsid": "rs75017182",
          "vcfCall": "G|G"
        },
        {
          "position": 97593238,
          "rsid": "rs72549305",
          "vcfCall": "T|T"
        },
        {
          "position": 97593289,
          "rsid": "rs143154602",
          "vcfCall": "G|G"
        },
        {
          "position": 97593322,
          "rsid": "rs183385770",
          "vcfCall": "C|C"
        },
        {
          "position": 97593343,
          "rsid": "rs72549306",
          "vcfCall": "C|C"
        },
        {
          "position": 97593379,
          "rsid": "rs201018345",
          "vcfCall": "C|C"
        },
        {
          "position": 97595083,
          "rsid": "rs145112791",
          "vcfCall": "G|G"
        },
        {
          "position": 97595088,
          "rsid": "rs150437414",
          "vcfCall": "A|A"
        },
        {
          "position": 97595149,
          "rsid": "rs146356975",
          "vcfCall": "T|T"
        },
        {
          "position": 97679170,
          "rsid": "rs45589337",
          "vcfCall": "T|T"
        },
        {
          "position": 97691776,
          "rsid": "rs1801266",
          "vcfCall": "G|G"
        },
        {
          "position": 97699399,
          "rsid": "rs72549307",
          "vcfCall": "T|T"
        },
        {
          "position": 97699430,
          "rsid": "rs72549308",
          "vcfCall": "T|T"
        },
        {
          "position": 97699474,
          "rsid": "rs115232898",
          "vcfCall": "T|T"
        },
        {
          "position": 97699506,
          "rsid": "rs6670886",
          "vcfCall": "C|C"
        },
        {
          "position": 97699533,
          "rsid": "rs139834141",
          "vcfCall": "C|C"
        },
        {
          "position": 97699535,
          "rsid": "rs2297595",
          "vcfCall": "T|T"
        },
        {
          "position": 97721542,
          "rsid": "rs200562975",
          "vcfCall": "T|T"
        },
        {
          "position": 97721650,
          "rsid": "rs141462178",
          "vcfCall": "T|T"
        },
        {
          "position": 97740400,
          "rsid": "rs150385342",
          "vcfCall": "C|C"
        },
        {
          "position": 97740410,
          "rsid": "rs72549309",
          "vcfCall": "GATGA|GATGA"
        },
        {
          "position": 97883329,
          "rsid": "rs1801265",
          "vcfCall": "A|A"
        },
        {
          "position": 97883352,
          "rsid": "rs80081766",
          "vcfCall": "C|C"
        },
        {
          "position": 97883353,
          "rsid": "rs72549310",
          "vcfCall": "G|G"
        },
        {
          "position": 97883368,
          "rsid": "rs150036960",
          "vcfCall": "G|G"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr19",
      "gene": "IFNL3",
      "diplotypes": [
        {
          "name": "rs12979860 reference (C)/rs12979860 reference (C)",
          "haplotype1": {
            "name": "rs12979860 reference (C)",
            "sequences": [
              "39248147:C;"
            ]
          },
          "haplotype2": {
            "name": "rs12979860 reference (C)",
            "sequences": [
              "39248147:C;"
            ]
          },
          "score": 2
        }
      ],
      "haplotypes": [
        {
          "name": "rs12979860 reference (C)",
          "sequences": [
            "39248147:C;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 39248147,
          "rsid": "rs12979860",
          "vcfCall": "C|C"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr13",
      "gene": "NUDT15",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "48037748:T;48037749:G;48037782:AGGAGTC;48037798:G;48037825:C;48037834:C;48037847:G;48037849:A;48037885:G;48037902:C;48040977:GA;48041103:T;48041113:G;48045690:C;48045719:C;48045720:G;48045771:T;"
            ]
          },
          "haplotype2": {
            "name": "*1",
            "sequences": [
              "48037748:T;48037749:G;48037782:AGGAGTC;48037798:G;48037825:C;48037834:C;48037847:G;48037849:A;48037885:G;48037902:C;48040977:GA;48041103:T;48041113:G;48045690:C;48045719:C;48045720:G;48045771:T;"
            ]
          },
          "score": 34
        }
      ],
      "haplotypes": [
        {
          "name": "*1",
          "sequences": [
            "48037748:T;48037749:G;48037782:AGGAGTC;48037798:G;48037825:C;48037834:C;48037847:G;48037849:A;48037885:G;48037902:C;48040977:GA;48041103:T;48041113:G;48045690:C;48045719:C;48045720:G;48045771:T;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 48037748,
          "rsid": "rs769369441",
          "vcfCall": "T|T"
        },
        {
          "position": 48037749,
          "rsid": null,
          "vcfCall": "G|G"
        },
        {
          "position": 48037782,
          "rsid": "rs746071566",
          "vcfCall": "AGGAGTC|AGGAGTC"
        },
        {
          "position": 48037798,
          "rsid": "rs186364861",
          "vcfCall": "G|G"
        },
        {
          "position": 48037825,
          "rsid": "rs777311140",
          "vcfCall": "C|C"
        },
        {
          "position": 48037834,
          "rsid": "rs1202487323",
          "vcfCall": "C|C"
        },
        {
          "position": 48037847,
          "rsid": "rs766023281",
          "vcfCall": "G|G"
        },
        {
          "position": 48037849,
          "rsid": null,
          "vcfCall": "A|A"
        },
        {
          "position": 48037885,
          "rsid": "rs1950545307",
          "vcfCall": "G|G"
        },
        {
          "position": 48037902,
          "rsid": "rs149436418",
          "vcfCall": "C|C"
        },
        {
          "position": 48040977,
          "rsid": "rs1457579126",
          "vcfCall": "GA|GA"
        },
        {
          "position": 48041103,
          "rsid": "rs761191455",
          "vcfCall": "T|T"
        },
        {
          "position": 48041113,
          "rsid": "rs1368252918",
          "vcfCall": "G|G"
        },
        {
          "position": 48045690,
          "rsid": "rs768324690",
          "vcfCall": "C|C"
        },
        {
          "position": 48045719,
          "rsid": "rs116855232",
          "vcfCall": "C|C"
        },
        {
          "position": 48045720,
          "rsid": "rs147390019",
          "vcfCall": "G|G"
        },
        {
          "position": 48045771,
          "rsid": "rs139551410",
          "vcfCall": "T|T"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr19",
      "gene": "RYR1",
      "diplotypes": [
        {
          "name": "Reference/Reference",
          "haplotype1": {
            "name": "Reference",
            "sequences": [
              "38440802:T;38440829:C;38444211:C;38444212:G;38446710:G;38448673:C;38448712:G;38451842:C;38451850:C;38455359:A;38455463:G;38455471:C;38455472:G;38455528:C;38457545:C;38457546:G;38494564:C;38494565:G;38494579:G;38496283:C;38499223:G;38499644:TGGA;38499655:G;38499670:C;38499731:G;38499975:G;38499993:G;38499997:G;38500636:C;38500642:C;38500643:G;38500654:C;38500655:G;38500898:C;38500899:G;38512321:G;38543832:G;38580004:A;38580094:C;38580114:C;38580370:C;38580403:G;38580440:G;38584989:T;"
            ]
          },
          "haplotype2": {
            "name": "Reference",
            "sequences": [
              "38440802:T;38440829:C;38444211:C;38444212:G;38446710:G;38448673:C;38448712:G;38451842:C;38451850:C;38455359:A;38455463:G;38455471:C;38455472:G;38455528:C;38457545:C;38457546:G;38494564:C;38494565:G;38494579:G;38496283:C;38499223:G;38499644:TGGA;38499655:G;38499670:C;38499731:G;38499975:G;38499993:G;38499997:G;38500636:C;38500642:C;38500643:G;38500654:C;38500655:G;38500898:C;38500899:G;38512321:G;38543832:G;38580004:A;38580094:C;38580114:C;38580370:C;38580403:G;38580440:G;38584989:T;"
            ]
          },
          "score": 88
        }
      ],
      "haplotypes": [
        {
          "name": "Reference",
          "sequences": [
            "38440802:T;38440829:C;38444211:C;38444212:G;38446710:G;38448673:C;38448712:G;38451842:C;38451850:C;38455359:A;38455463:G;38455471:C;38455472:G;38455528:C;38457545:C;38457546:G;38494564:C;38494565:G;38494579:G;38496283:C;38499223:G;38499644:TGGA;38499655:G;38499670:C;38499731:G;38499975:G;38499993:G;38499997:G;38500636:C;38500642:C;38500643:G;38500654:C;38500655:G;38500898:C;38500899:G;38512321:G;38543832:G;38580004:A;38580094:C;38580114:C;38580370:C;38580403:G;38580440:G;38584989:T;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 38440802,
          "rsid": "rs193922747",
          "vcfCall": "T|T"
        },
        {
          "position": 38440829,
          "rsid": "rs193922748",
          "vcfCall": "C|C"
        },
        {
          "position": 38444211,
          "rsid": "rs118192161",
          "vcfCall": "C|C"
        },
        {
          "position": 38444212,
          "rsid": "rs193922753",
          "vcfCall": "G|G"
        },
        {
          "position": 38446710,
          "rsid": "rs1801086",
          "vcfCall": "G|G"
        },
        {
          "position": 38448673,
          "rsid": "rs193922762",
          "vcfCall": "C|C"
        },
        {
          "position": 38448712,
          "rsid": "rs121918592",
          "vcfCall": "G|G"
        },
        {
          "position": 38451842,
          "rsid": "rs193922764",
          "vcfCall": "C|C"
        },
        {
          "position": 38451850,
          "rsid": "rs118192116",
          "vcfCall": "C|C"
        },
        {
          "position": 38455359,
          "rsid": "rs118192162",
          "vcfCall": "A|A"
        },
        {
          "position": 38455463,
          "rsid": "rs111888148",
          "vcfCall": "G|G"
        },
        {
          "position": 38455471,
          "rsid": "rs193922768",
          "vcfCall": "C|C"
        },
        {
          "position": 38455472,
          "rsid": "rs144336148",
          "vcfCall": "G|G"
        },
        {
          "position": 38455528,
          "rsid": "rs193922770",
          "vcfCall": "C|C"
        },
        {
          "position": 38457545,
          "rsid": "rs118192172",
          "vcfCall": "C|C"
        },
        {
          "position": 38457546,
          "rsid": "rs193922772",
          "vcfCall": "G|G"
        },
        {
          "position": 38494564,
          "rsid": "rs118192175",
          "vcfCall": "C|C"
        },
        {
          "position": 38494565,
          "rsid": "rs118192163",
          "vcfCall": "G|G"
        },
        {
          "position": 38494579,
          "rsid": "rs118192176",
          "vcfCall": "G|G"
        },
        {
          "position": 38496283,
          "rsid": "rs118192177",
          "vcfCall": "C|C"
        },
        {
          "position": 38499223,
          "rsid": "rs112563513",
          "vcfCall": "G|G"
        },
        {
          "position": 38499644,
          "rsid": "rs121918596",
          "vcfCall": "TGGA|TGGA"
        },
        {
          "position": 38499655,
          "rsid": "rs193922802",
          "vcfCall": "G|G"
        },
        {
          "position": 38499670,
          "rsid": "rs193922803",
          "vcfCall": "C|C"
        },
        {
          "position": 38499731,
          "rsid": "rs193922807",
          "vcfCall": "G|G"
        },
        {
          "position": 38499975,
          "rsid": "rs193922809",
          "vcfCall": "G|G"
        },
        {
          "position": 38499993,
          "rsid": "rs121918593",
          "vcfCall": "G|G"
        },
        {
          "position": 38499997,
          "rsid": "rs28933396",
          "vcfCall": "G|G"
        },
        {
          "position": 38500636,
          "rsid": "rs118192124",
          "vcfCall": "C|C"
        },
        {
          "position": 38500642,
          "rsid": "rs193922816",
          "vcfCall": "C|C"
        },
        {
          "position": 38500643,
          "rsid": "rs118192122",
          "vcfCall": "G|G"
        },
        {
          "position": 38500654,
          "rsid": "rs28933397",
          "vcfCall": "C|C"
        },
        {
          "position": 38500655,
          "rsid": "rs121918594",
          "vcfCall": "G|G"
        },
        {
          "position": 38500898,
          "rsid": "rs118192178",
          "vcfCall": "C|C"
        },
        {
          "position": 38500899,
          "rsid": "rs193922818",
          "vcfCall": "G|G"
        },
        {
          "position": 38512321,
          "rsid": "rs193922832",
          "vcfCall": "G|G"
        },
        {
          "position": 38543832,
          "rsid": "rs193922843",
          "vcfCall": "G|G"
        },
        {
          "position": 38580004,
          "rsid": "rs118192167",
          "vcfCall": "A|A"
        },
        {
          "position": 38580094,
          "rsid": "rs121918595",
          "vcfCall": "C|C"
        },
        {
          "position": 38580114,
          "rsid": "rs193922876",
          "vcfCall": "C|C"
        },
        {
          "position": 38580370,
          "rsid": "rs193922878",
          "vcfCall": "C|C"
        },
        {
          "position": 38580403,
          "rsid": "rs118192168",
          "vcfCall": "G|G"
        },
        {
          "position": 38580440,
          "rsid": "rs63749869",
          "vcfCall": "G|G"
        },
        {
          "position": 38584989,
          "rsid": "rs118192170",
          "vcfCall": "T|T"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr12",
      "gene": "SLCO1B1",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "21172734:C;21172776:G;21172782:T;21174595:T;21176804:A;21176868:A;21176879:C;21176883:A;21178615:T;21178957:A;21196951:A;21196976:G;21200595:T;21202553:T;21202555:C;21202649:A;21202664:G;21205921:A;21205999:G;21239042:A;21239077:A;21239113:A;21239145:C;21239158:C;"
            ]
          },
          "haplotype2": {
            "name": "*1",
            "sequences": [
              "21172734:C;21172776:G;21172782:T;21174595:T;21176804:A;21176868:A;21176879:C;21176883:A;21178615:T;21178957:A;21196951:A;21196976:G;21200595:T;21202553:T;21202555:C;21202649:A;21202664:G;21205921:A;21205999:G;21239042:A;21239077:A;21239113:A;21239145:C;21239158:C;"
            ]
          },
          "score": 48
        }
      ],
      "haplotypes": [
        {
          "name": "*1",
          "sequences": [
            "21172734:C;21172776:G;21172782:T;21174595:T;21176804:A;21176868:A;21176879:C;21176883:A;21178615:T;21178957:A;21196951:A;21196976:G;21200595:T;21202553:T;21202555:C;21202649:A;21202664:G;21205921:A;21205999:G;21239042:A;21239077:A;21239113:A;21239145:C;21239158:C;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 21172734,
          "rsid": "rs139257324",
          "vcfCall": "C|C"
        },
        {
          "position": 21172776,
          "rsid": "rs373327528",
          "vcfCall": "G|G"
        },
        {
          "position": 21172782,
          "rsid": "rs56101265",
          "vcfCall": "T|T"
        },
        {
          "position": 21174595,
          "rsid": "rs56061388",
          "vcfCall": "T|T"
        },
        {
          "position": 21176804,
          "rsid": "rs2306283",
          "vcfCall": "A|A"
        },
        {
          "position": 21176868,
          "rsid": "rs2306282",
          "vcfCall": "A|A"
        },
        {
          "position": 21176879,
          "rsid": "rs11045819",
          "vcfCall": "C|C"
        },
        {
          "position": 21176883,
          "rsid": "rs72559745",
          "vcfCall": "A|A"
        },
        {
          "position": 21178615,
          "rsid": "rs4149056",
          "vcfCall": "T|T"
        },
        {
          "position": 21178957,
          "rsid": "rs79135870",
          "vcfCall": "A|A"
        },
        {
          "position": 21196951,
          "rsid": "rs11045852",
          "vcfCall": "A|A"
        },
        {
          "position": 21196976,
          "rsid": "rs11045853",
          "vcfCall": "G|G"
        },
        {
          "position": 21200595,
          "rsid": "rs55901008",
          "vcfCall": "T|T"
        },
        {
          "position": 21202553,
          "rsid": "rs1228465562",
          "vcfCall": "T|T"
        },
        {
          "position": 21202555,
          "rsid": "rs59113707",
          "vcfCall": "C|C"
        },
        {
          "position": 21202649,
          "rsid": "rs56387224",
          "vcfCall": "A|A"
        },
        {
          "position": 21202664,
          "rsid": "rs142965323",
          "vcfCall": "G|G"
        },
        {
          "position": 21205921,
          "rsid": "rs72559748",
          "vcfCall": "A|A"
        },
        {
          "position": 21205999,
          "rsid": "rs59502379",
          "vcfCall": "G|G"
        },
        {
          "position": 21239042,
          "rsid": "rs34671512",
          "vcfCall": "A|A"
        },
        {
          "position": 21239077,
          "rsid": "rs56199088",
          "vcfCall": "A|A"
        },
        {
          "position": 21239113,
          "rsid": "rs55737008",
          "vcfCall": "A|A"
        },
        {
          "position": 21239145,
          "rsid": "rs200995543",
          "vcfCall": "C|C"
        },
        {
          "position": 21239158,
          "rsid": "rs140790673",
          "vcfCall": "C|C"
        }
      ],
      "variantsOfInterest": [],
      "matchData": {
        "missingPositions": [
          {
            "chromosome": "chr12",
            "position": 21176871,
            "cpicPosition": 21176871,
            "rsid": null,
            "chromosomeHgvsName": "g.21176871G\u003eA",
            "cpicAlleles": [
              "A",
              "G"
            ],
            "cpicToVcfAlleleMap": {
              "A": "A",
              "G": "G"
            },
            "ref": "G",
            "alts": [
              "A"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21176898,
            "cpicPosition": 21176898,
            "rsid": "rs77271279",
            "chromosomeHgvsName": "g.21176898G\u003eT",
            "cpicAlleles": [
              "G",
              "T"
            ],
            "cpicToVcfAlleleMap": {
              "T": "T",
              "G": "G"
            },
            "ref": "G",
            "alts": [
              "T"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21178612,
            "cpicPosition": 21178612,
            "rsid": "rs141467543",
            "chromosomeHgvsName": "g.21178612A\u003eG",
            "cpicAlleles": [
              "A",
              "G"
            ],
            "cpicToVcfAlleleMap": {
              "A": "A",
              "G": "G"
            },
            "ref": "A",
            "alts": [
              "G"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21196975,
            "cpicPosition": 21196975,
            "rsid": "rs183501729",
            "chromosomeHgvsName": "g.21196975C\u003eT",
            "cpicAlleles": [
              "C",
              "T"
            ],
            "cpicToVcfAlleleMap": {
              "C": "C",
              "T": "T"
            },
            "ref": "C",
            "alts": [
              "T"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21200544,
            "cpicPosition": 21200544,
            "rsid": "rs72559747",
            "chromosomeHgvsName": "g.21200544C\u003eG",
            "cpicAlleles": [
              "C",
              "G"
            ],
            "cpicToVcfAlleleMap": {
              "C": "C",
              "G": "G"
            },
            "ref": "C",
            "alts": [
              "G"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21206031,
            "cpicPosition": 21206031,
            "rsid": "rs74064213",
            "chromosomeHgvsName": "g.21206031A\u003eG",
            "cpicAlleles": [
              "A",
              "G"
            ],
            "cpicToVcfAlleleMap": {
              "A": "A",
              "G": "G"
            },
            "ref": "A",
            "alts": [
              "G"
            ]
          },
          {
            "chromosome": "chr12",
            "position": 21222355,
            "cpicPosition": 21222355,
            "rsid": "rs71581941",
            "chromosomeHgvsName": "g.21222355C\u003eT",
            "cpicAlleles": [
              "C",
              "T"
            ],
            "cpicToVcfAlleleMap": {
              "C": "C",
              "T": "T"
            },
            "ref": "C",
            "alts": [
              "T"
            ]
          }
        ],
        "mismatchedAlleles": []
      },
      "uncallableHaplotypes": [
        "*41",
        "*45",
        "*38"
      ],
      "ignoredHaplotypes": []
    },
    {
      "alleleDefinitionVersion": "04/20/22",
      "chromosome": "chr6",
      "gene": "TPMT",
      "diplotypes": [
        {
          "name": "*1/*1",
          "haplotype1": {
            "name": "*1",
            "sequences": [
              "18130687:T;18130694:T;18130725:A;18130729:C;18130758:A;18130762:C;18130772:A;18130781:C;18132136:A;18132147:A;18132163:C;18133845:T;18133847:C;18133870:A;18133884:G;18133887:T;18133890:C;18138969:C;18138970:G;18138997:C;18139027:C;18139689:C;18139710:G;18143597:T;18143606:T;18143613:C;18143622:C;18143643:A;18143700:C;18143718:G;18143724:C;18143728:C;18147838:G;18147845:C;18147851:G;18147856:A;18147910:A;18149004:G;18149022:C;18149032:C;18149045:T;18149126:A;18149127:T;"
            ]
          },
          "haplotype2": {
            "name": "*1",
            "sequences": [
              "18130687:T;18130694:T;18130725:A;18130729:C;18130758:A;18130762:C;18130772:A;18130781:C;18132136:A;18132147:A;18132163:C;18133845:T;18133847:C;18133870:A;18133884:G;18133887:T;18133890:C;18138969:C;18138970:G;18138997:C;18139027:C;18139689:C;18139710:G;18143597:T;18143606:T;18143613:C;18143622:C;18143643:A;18143700:C;18143718:G;18143724:C;18143728:C;18147838:G;18147845:C;18147851:G;18147856:A;18147910:A;18149004:G;18149022:C;18149032:C;18149045:T;18149126:A;18149127:T;"
            ]
          },
          "score": 86
        }
      ],
      "haplotypes": [
        {
          "name": "*1",
          "sequences": [
            "18130687:T;18130694:T;18130725:A;18130729:C;18130758:A;18130762:C;18130772:A;18130781:C;18132136:A;18132147:A;18132163:C;18133845:T;18133847:C;18133870:A;18133884:G;18133887:T;18133890:C;18138969:C;18138970:G;18138997:C;18139027:C;18139689:C;18139710:G;18143597:T;18143606:T;18143613:C;18143622:C;18143643:A;18143700:C;18143718:G;18143724:C;18143728:C;18147838:G;18147845:C;18147851:G;18147856:A;18147910:A;18149004:G;18149022:C;18149032:C;18149045:T;18149126:A;18149127:T;"
          ]
        }
      ],
      "phased": true,
      "variants": [
        {
          "position": 18130687,
          "rsid": "rs1142345",
          "vcfCall": "T|T"
        },
        {
          "position": 18130694,
          "rsid": "rs150900439",
          "vcfCall": "T|T"
        },
        {
          "position": 18130725,
          "rsid": "rs72552736",
          "vcfCall": "A|A"
        },
        {
          "position": 18130729,
          "rsid": "rs139392616",
          "vcfCall": "C|C"
        },
        {
          "position": 18130758,
          "rsid": "rs398122996",
          "vcfCall": "A|A"
        },
        {
          "position": 18130762,
          "rsid": "rs56161402",
          "vcfCall": "C|C"
        },
        {
          "position": 18130772,
          "rsid": "rs377085266",
          "vcfCall": "A|A"
        },
        {
          "position": 18130781,
          "rsid": "rs1800584",
          "vcfCall": "C|C"
        },
        {
          "position": 18132136,
          "rsid": "rs72556347",
          "vcfCall": "A|A"
        },
        {
          "position": 18132147,
          "rsid": "rs79901429",
          "vcfCall": "A|A"
        },
        {
          "position": 18132163,
          "rsid": null,
          "vcfCall": "C|C"
        },
        {
          "position": 18133845,
          "rsid": "rs75543815",
          "vcfCall": "T|T"
        },
        {
          "position": 18133847,
          "rsid": "rs6921269",
          "vcfCall": "C|C"
        },
        {
          "position": 18133870,
          "rsid": "rs772832951",
          "vcfCall": "A|A"
        },
        {
          "position": 18133884,
          "rsid": "rs74423290",
          "vcfCall": "G|G"
        },
        {
          "position": 18133887,
          "rsid": "rs201695576",
          "vcfCall": "T|T"
        },
        {
          "position": 18133890,
          "rsid": "rs9333570",
          "vcfCall": "C|C"
        },
        {
          "position": 18138969,
          "rsid": "rs144041067",
          "vcfCall": "C|C"
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}