Mercurial > repos > bgruening > sklearn_generalized_linear
changeset 4:fd6c50f21cd0 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tools/sklearn commit cea052cf3b8dd4f3620253bd222e126de32e7466
| author | bgruening |
|---|---|
| date | Thu, 22 Mar 2018 13:47:44 -0400 |
| parents | be8d2100f07b |
| children | f93e7b870023 |
| files | generalized_linear.xml main_macros.xml |
| diffstat | 2 files changed, 6 insertions(+), 2 deletions(-) [+] |
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--- a/generalized_linear.xml Tue Mar 13 06:32:19 2018 -0400 +++ b/generalized_linear.xml Thu Mar 22 13:47:44 2018 -0400 @@ -33,22 +33,24 @@ options = params["selected_tasks"]["selected_algorithms"]["options"] #if $selected_tasks.selected_algorithms.input_options.selected_input=="tabular": +header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header1"] else None X = read_columns( "$selected_tasks.selected_algorithms.input_options.infile1", "$selected_tasks.selected_algorithms.input_options.col1", sep='\t', - header=None, + header=header, parse_dates=True ) #else: X = mmread(open("$selected_tasks.selected_algorithms.input_options.infile1", 'r')) #end if +header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header2"] else None y = read_columns( "$selected_tasks.selected_algorithms.input_options.infile2", "$selected_tasks.selected_algorithms.input_options.col2", sep='\t', - header=None, + header=header, parse_dates=True )
--- a/main_macros.xml Tue Mar 13 06:32:19 2018 -0400 +++ b/main_macros.xml Thu Mar 22 13:47:44 2018 -0400 @@ -336,8 +336,10 @@ <xml name="samples_tabular" token_multiple1="False" token_multiple2="False"> <param name="infile1" type="data" format="tabular" label="Training samples dataset:"/> + <param name="header1" type="boolean" optional="True" truevalue="booltrue" falsevalue="boolfalse" checked="False" label="Does the dataset contain header:" /> <param name="col1" multiple="@MULTIPLE1@" type="data_column" data_ref="infile1" label="Select target column(s):"/> <param name="infile2" type="data" format="tabular" label="Dataset containing class labels:"/> + <param name="header2" type="boolean" optional="True" truevalue="booltrue" falsevalue="boolfalse" checked="False" label="Does the dataset contain header:" /> <param name="col2" multiple="@MULTIPLE2@" type="data_column" data_ref="infile2" label="Select target column(s):"/> <yield/> </xml>