Mercurial > repos > bgruening > split_file_to_collection
annotate split_file_to_collection.xml @ 4:0850f2dfba13 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
author | bgruening |
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date | Wed, 09 Oct 2019 07:34:49 -0400 |
parents | 2ddc36385d7a |
children | e77b954f0da5 |
rev | line source |
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4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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1 <tool id="split_file_to_collection" name="Split file" version="0.3.0"> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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2 <description>to dataset collection</description> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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3 <macros> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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4 <xml name="regex_sanitizer"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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5 <sanitizer> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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6 <valid> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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7 <add preset="string.printable"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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8 <remove value="\" /> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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9 <remove value="'" /> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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10 </valid> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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11 <mapping initial="none"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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12 <add source="\" target="__backslash__" /> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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13 <add source="'" target="__sq__"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
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14 </mapping> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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15 </sanitizer> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
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16 </xml> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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17 <xml name="numnew_fname"> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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18 <conditional name="select_mode"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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19 <param name="mode" type="select" label="Specify number of output files or number of records per file?" help="Specify the number of records ('chunk size') to place in each file. The 'Number of new files' parameter will be ignored."> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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changeset
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20 <option value="chunk">Number of records per file ('chunk mode')</option> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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changeset
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21 <option value="numnew">Number of output files</option> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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22 </param> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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23 <when value="chunk"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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24 <param name="chunksize" type="integer" label="Chunk size" min="1" value="1" help="Number of records per output file."/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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25 </when> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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26 <when value="numnew"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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changeset
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27 <param name="numnew" type="integer" label="Number of new files" min="1" value="1"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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28 </when> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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29 </conditional> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
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30 <param name="newfilenames" type="text" label="Base name for new files in collection" |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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31 help="This will increment automatically - if input is 'file', then output is 'file0', 'file1', etc." value="split_file"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
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32 <conditional name="select_allocate"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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33 <param name="allocate" type="select" label="Method to allocate records to new files" help="See the information section for a diagram"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
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34 <option value="random">At random</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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35 <option value="batch">Maintain record order</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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36 <option value="byrow" selected="true">Alternate output files</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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37 </param> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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38 <when value="random"> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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39 <param name="seed" type="integer" label="Random number seed" help="For reproducibility, set this to some arbitrary integer (e.g. '1010')" value="1010"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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40 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
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41 <when value="batch"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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42 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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43 <when value="byrow"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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44 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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45 </conditional> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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46 </xml> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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47 </macros> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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48 <requirements> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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49 <requirement type="package" version="3.5">python</requirement> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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50 </requirements> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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51 <command detect_errors="aggressive"><![CDATA[ |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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52 mkdir ./out && |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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53 python '$__tool_directory__/split_file_to_collection.py' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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54 --out ./out |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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55 --in '$split_parms.input' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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56 --ftype '$split_parms.select_ftype' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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57 #if $split_parms.select_ftype == "tabular": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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58 --top '$split_parms.top' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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59 --by '$split_parms.split_by.select_split_by' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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60 #if $split_parms.split_by.select_split_by == "col": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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61 --id_column '$split_parms.split_by.id_col' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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62 --match '$split_parms.split_by.match_regex' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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63 --sub '$split_parms.split_by.sub_regex' |
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2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
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64 #else |
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0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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65 #if $split_parms.split_by.select_mode.mode == "numnew": |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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66 --numnew '$split_parms.split_by.select_mode.numnew' |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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67 #else |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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68 --chunksize $split_parms.split_by.select_mode.chunksize |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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69 #end if |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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70 #if $split_parms.split_by.select_allocate.allocate == "random": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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71 --rand |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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72 --seed '$split_parms.split_by.rand.seed' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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73 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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74 #if $split_parms.split_by.select_allocate.allocate == "batch": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
75 --batch |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
76 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
77 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
78 #else |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
79 #if $split_parms.select_ftype == "generic" |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
80 --generic_re '$split_parms.generic_regex' |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
81 #if $split_parms.split_after == 'true': |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
82 --split_after |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
83 #end if |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
84 #end if |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
85 #if $split_parms.select_mode.mode == "numnew": |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
86 --numnew '$split_parms.select_mode.numnew' |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
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87 #else |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
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88 --chunksize $split_parms.select_mode.chunksize |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
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89 #end if |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
90 #if $split_parms.select_allocate.allocate == "random": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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91 --rand |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
92 --seed '$split_parms.select_allocate.seed' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
93 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
94 #if $split_parms.select_allocate.allocate == "batch": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
95 --batch |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
96 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
97 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
98 #if ($split_parms.select_ftype == "tabular" and $split_parms.split_by.select_split_by == "row"): |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
99 --file_names '$split_parms.split_by.newfilenames' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
100 --file_ext '$split_parms.select_ftype' |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
101 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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102 #if $split_parms.select_ftype != "tabular": |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
103 --file_names '$split_parms.newfilenames' |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
104 #if $split_parms.select_ftype == "generic" |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
105 --file_ext '$split_parms.input.ext' |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
106 #else |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
107 --file_ext '$split_parms.select_ftype' |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
108 #end if |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
109 #end if |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
110 ]]></command> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
111 <inputs> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
112 <conditional name="split_parms"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
113 <param name="select_ftype" type="select" label="Select the file type to split"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
114 <option value="mgf">MGF</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
115 <option value="fastq">FASTQ</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
116 <option value="tabular">Tabular</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
117 <option value="fasta">FASTA</option> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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|
118 <option value="sdf">SD-files</option> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
119 <option value="txt">Text files</option> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
120 <option value="generic">Generic</option> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
121 </param> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
122 <when value="tabular"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
123 <param name="input" type="data" format="tabular" label="Tabular file to split"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
124 <param name="top" type="integer" value="0" min="0" label="Number of header lines to transfer to new files"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
125 <conditional name="split_by"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
126 <param name="select_split_by" type="select" label="Split by row or by a column?"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
127 <option value="row">By row</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
128 <option value="col">By column</option> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
129 </param> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
130 <when value="col"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
131 <param name="id_col" type="data_column" label="Column to split on" data_ref="input"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
132 <param name="match_regex" type="text" label="Regex to match contents of id column" value="(.*)"> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
133 <expand macro="regex_sanitizer"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
134 </param> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
135 <param name="sub_regex" type="text" label="Pattern to replace match with" value="\1"> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
136 <expand macro="regex_sanitizer"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
137 </param> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
138 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
139 <when value="row"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
140 <expand macro="numnew_fname"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
141 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
142 </conditional> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
143 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
144 <when value="mgf"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
145 <param name="input" type="data" format="mgf" label="MGF file to split"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
146 <expand macro="numnew_fname"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
147 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
148 <when value="fastq"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
149 <param name="input" type="data" format="fastq" label="FASTQ file to split"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
150 <expand macro="numnew_fname"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
151 </when> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
152 <when value="fasta"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
153 <param name="input" type="data" format="fasta" label="FASTA file to split"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
154 <expand macro="numnew_fname"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
155 </when> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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diff
changeset
|
156 <when value="sdf"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
157 <param name="input" type="data" format="sdf" label="SD-file to split"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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diff
changeset
|
158 <expand macro="numnew_fname"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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diff
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|
159 </when> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
160 <when value="txt"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
161 <param name="input" type="data" format="txt" label="Text file to split"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
162 <expand macro="numnew_fname"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
163 </when> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
164 <when value="generic"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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changeset
|
165 <param name="input" type="data" format="txt" label="File to split"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
166 <param name="generic_regex" type="text" label="Regex to match record separator" value="^.*"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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changeset
|
167 <expand macro="regex_sanitizer"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
168 </param> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
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changeset
|
169 <expand macro="numnew_fname"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
170 <param name="split_after" type="select" value="false" label="Split records before or after the separator?" help="If before, the separator will appear at the start of each record; if after, at the end"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
171 <option value="false" selected="true">Before</option> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
172 <option value="true">After</option> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
173 </param> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
174 </when> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
175 </conditional> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
176 </inputs> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
177 <outputs> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
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changeset
|
178 <collection name="list_output_tab" type="list" label="${tool.name} on ${on_string}"> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
179 <discover_datasets pattern="__name__" directory="out" visible="false" format="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
180 <filter>split_parms['select_ftype'] == "tabular"</filter> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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diff
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|
181 </collection> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
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diff
changeset
|
182 <collection name="list_output_mgf" type="list" label="${tool.name} on ${on_string}"> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
183 <discover_datasets pattern="__name__" directory="out" visible="false" format="mgf"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
184 <filter>split_parms['select_ftype'] == "mgf"</filter> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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diff
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|
185 </collection> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
186 <collection name="list_output_fasta" type="list" label="${tool.name} on ${on_string}"> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
187 <discover_datasets pattern="__name__" directory="out" visible="false" format="fasta"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
188 <filter>split_parms['select_ftype'] == "fasta"</filter> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
189 </collection> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
190 <collection name="list_output_fastq" type="list" label="${tool.name} on ${on_string}"> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
191 <discover_datasets pattern="__name__" directory="out" visible="false" format="fastq"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
192 <filter>split_parms['select_ftype'] == "fastq"</filter> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
193 </collection> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
194 <collection name="list_output_sdf" type="list" label="${tool.name} on ${on_string}"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
195 <discover_datasets pattern="__name__" directory="out" visible="false" format="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
196 <filter>split_parms['select_ftype'] == "sdf"</filter> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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diff
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|
197 </collection> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
198 <collection name="list_output_txt" type="list" label="${tool.name} on ${on_string}"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
199 <discover_datasets pattern="__name__" directory="out" visible="false" format="txt"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
200 <filter>split_parms['select_ftype'] == "txt"</filter> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
201 </collection> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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changeset
|
202 <collection name="list_output_generic" type="list" label="${tool.name} on ${on_string}"> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
203 <discover_datasets pattern="__name_and_ext__" directory="out" visible="false"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
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|
204 <filter>split_parms['select_ftype'] == "generic"</filter> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
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|
205 </collection> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
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|
206 </outputs> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
207 <tests> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
208 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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|
209 <param name="input" value="test.tabular" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
210 <param name="select_ftype" value="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
211 <param name="select_split_by" value="col"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
212 <param name="id_col" value="1"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
213 <param name="match_regex" value="(.*)\.mgf"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
214 <param name="sub_regex" value="\1.tab"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
215 <param name="top" value="2"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
216 <output_collection name="list_output_tab" type="list"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
217 <element name="foo.tab" file="foo.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
218 <element name="foo2.tab" file="foo2.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
219 <element name="foo3.tab" file="foo3.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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diff
changeset
|
220 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
221 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
222 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
223 <param name="input" value="test.tabular" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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224 <param name="select_ftype" value="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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225 <param name="select_split_by" value="row"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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226 <param name="top" value="2"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
227 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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228 <param name="numnew" value="2"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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229 <param name="newfilenames" value="test"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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230 <output_collection name="list_output_tab" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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231 <element name="test_000000.tabular" file="test_0.tabular" ftype="tabular"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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232 <element name="test_000001.tabular" file="test_1.tabular" ftype="tabular"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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233 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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234 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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235 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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236 <param name="input" value="test.tabular" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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237 <param name="select_ftype" value="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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238 <param name="select_split_by" value="row"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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239 <param name="top" value="2"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
240 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
241 <param name="numnew" value="2"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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242 <param name="newfilenames" value="batch_tab"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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243 <param name="allocate" value="batch"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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244 <output_collection name="list_output_tab" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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245 <element name="batch_tab_000000.tabular" file="batch_tab_0.tabular" ftype="tabular"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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246 <element name="batch_tab_000001.tabular" file="batch_tab_1.tabular" ftype="tabular"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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247 </output_collection> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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248 </test> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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249 <test> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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250 <param name="input" value="test.tabular" ftype="tabular"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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251 <param name="select_ftype" value="tabular"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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252 <param name="select_split_by" value="row"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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253 <param name="top" value="2"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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254 <param name="mode" value="chunk"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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255 <param name="chunksize" value="2"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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256 <param name="newfilenames" value="batch_tab"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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257 <param name="allocate" value="batch"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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258 <output_collection name="list_output_tab" type="list"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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259 <element name="batch_tab_000000.tabular" file="batch_tab_0.tabular" ftype="tabular"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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260 <element name="batch_tab_000001.tabular" file="batch_tab_1.tabular" ftype="tabular"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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261 </output_collection> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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262 </test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
263 <test> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
264 <param name="select_ftype" value="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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265 <param name="input" value="karyotype.txt" ftype="txt"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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266 <param name="mode" value="numnew"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
267 <param name="numnew" value="24"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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268 <param name="newfilenames" value="chr"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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269 <param name="allocate" value="batch"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
270 |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
271 <output_collection name="list_output_txt" type="list"> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
272 <element name="chr_000000.txt" file="chr_000000.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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273 <element name="chr_000001.txt" file="chr_000001.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
274 <element name="chr_000002.txt" file="chr_000002.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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275 <element name="chr_000003.txt" file="chr_000003.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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276 <element name="chr_000004.txt" file="chr_000004.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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277 <element name="chr_000005.txt" file="chr_000005.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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278 <element name="chr_000006.txt" file="chr_000006.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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279 <element name="chr_000007.txt" file="chr_000007.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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280 <element name="chr_000008.txt" file="chr_000008.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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281 <element name="chr_000009.txt" file="chr_000009.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
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changeset
|
282 <element name="chr_000010.txt" file="chr_000010.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
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changeset
|
283 <element name="chr_000011.txt" file="chr_000011.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
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changeset
|
284 <element name="chr_000012.txt" file="chr_000012.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
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changeset
|
285 <element name="chr_000013.txt" file="chr_000013.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
286 <element name="chr_000014.txt" file="chr_000014.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
287 <element name="chr_000015.txt" file="chr_000015.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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2
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changeset
|
288 <element name="chr_000016.txt" file="chr_000016.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
289 <element name="chr_000017.txt" file="chr_000017.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
290 <element name="chr_000018.txt" file="chr_000018.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
291 <element name="chr_000019.txt" file="chr_000019.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
292 <element name="chr_000020.txt" file="chr_000020.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
293 <element name="chr_000021.txt" file="chr_000021.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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294 <element name="chr_000022.txt" file="chr_000022.txt" ftype="txt"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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diff
changeset
|
295 <element name="chr_000023.txt" file="chr_000023.txt" ftype="txt"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
296 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
297 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
298 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
299 <param name="input" value="psm.tabular" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
300 <param name="select_ftype" value="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
301 <param name="select_split_by" value="col"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
302 <param name="id_col" value="10"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
303 <param name="match_regex" value="(.*)\.mgf"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
304 <param name="sub_regex" value="\1.tab"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
305 <param name="top" value="1"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
306 <output_collection name="list_output_tab" type="list"> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
307 <element name="file1.tab" file="file1.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
308 <element name="file2.tab" file="file2.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
309 <element name="file3.tab" file="file3.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
310 <element name="file4.tab" file="file4.tab" ftype="tabular"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
311 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
312 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
313 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
314 <param name="input" value="demo758Dacentroid.mgf" ftype="mgf"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
315 <param name="select_ftype" value="mgf"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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316 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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317 <param name="numnew" value="3"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
318 <param name="newfilenames" value="demo"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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319 <output_collection name="list_output_mgf" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
320 <element name="demo_000000.mgf" file="demo_0.mgf" ftype="mgf"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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2
diff
changeset
|
321 <element name="demo_000001.mgf" file="demo_1.mgf" ftype="mgf"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
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diff
changeset
|
322 <element name="demo_000002.mgf" file="demo_2.mgf" ftype="mgf"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
323 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
324 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
325 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
326 <param name="input" value="test.fasta" ftype="fasta"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
327 <param name="select_ftype" value="fasta"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
328 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
329 <param name="numnew" value="2"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
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diff
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|
330 <param name="newfilenames" value="test"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
331 <output_collection name="list_output_fasta" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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diff
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|
332 <element name="test_000000.fasta" file="test_0.fasta" ftype="fasta"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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changeset
|
333 <element name="test_000001.fasta" file="test_1.fasta" ftype="fasta"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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diff
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|
334 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
335 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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336 <test> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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diff
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|
337 <param name="input" value="test.fasta" ftype="fasta"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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diff
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|
338 <param name="select_ftype" value="fasta"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
339 <param name="mode" value="chunk"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
340 <param name="chunksize" value="3"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
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|
341 <param name="newfilenames" value="test"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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changeset
|
342 <output_collection name="list_output_fasta" type="list"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
343 <element name="test_000000.fasta" file="test_0.fasta" ftype="fasta"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
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changeset
|
344 <element name="test_000001.fasta" file="test_1.fasta" ftype="fasta"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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345 </output_collection> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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346 </test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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347 <test> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
348 <param name="input" value="test.fastq" ftype="fastq"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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349 <param name="select_ftype" value="fastq"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
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350 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
351 <param name="numnew" value="2"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
352 <param name="newfilenames" value="test"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
353 <output_collection name="list_output_fastq" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
354 <element name="test_000000.fastq" file="test_0.fastq" ftype="fastq"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
355 <element name="test_000001.fastq" file="test_1.fastq" ftype="fastq"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
356 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
357 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
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changeset
|
358 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
359 <param name="input" value="test.fasta" ftype="fasta"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
360 <param name="select_ftype" value="fasta"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
361 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
362 <param name="numnew" value="2"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
363 <param name="newfilenames" value="rand"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
364 <param name="allocate" value="random"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
365 <param name="seed" value="1010"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
366 <output_collection name="list_output_fasta" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
367 <element name="rand_000000.fasta" file="rand_0.fasta" ftype="fasta"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
368 <element name="rand_000001.fasta" file="rand_1.fasta" ftype="fasta"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
369 </output_collection> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
370 </test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
371 <test> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
372 <param name="input" value="test.fasta" ftype="fasta"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
373 <param name="select_ftype" value="fasta"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
374 <param name="mode" value="numnew"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
375 <param name="numnew" value="2"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
376 <param name="newfilenames" value="fasta_batch"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
377 <param name="allocate" value="batch"/> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
378 <output_collection name="list_output_fasta" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
379 <element name="fasta_batch_000000.fasta" file="fasta_batch_0.fasta" ftype="fasta"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
380 <element name="fasta_batch_000001.fasta" file="fasta_batch_1.fasta" ftype="fasta"/> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
parents:
diff
changeset
|
381 </output_collection> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
382 </test> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
383 <test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
384 <param name="input" value="test.tabular" ftype="txt"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
385 <param name="select_ftype" value="txt"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
386 <param name="mode" value="numnew"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
387 <param name="numnew" value="2"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
388 <param name="newfilenames" value="test"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
389 <output_collection name="list_output_txt" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
390 <element name="test_000000.txt" file="test_0.tabular" ftype="txt" lines_diff="1"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
391 <element name="test_000001.txt" file="test_1.tabular" ftype="txt" lines_diff="1"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
392 </output_collection> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
393 </test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
394 <test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
395 <param name="input" value="test.tabular" ftype="txt"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
396 <param name="select_ftype" value="generic"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
397 <param name="generic_regex" value="^.*"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
398 <param name="mode" value="numnew"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
399 <param name="numnew" value="2"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
400 <param name="newfilenames" value="test"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
401 <output_collection name="list_output_generic" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
402 <element name="test_000000" file="test_0.tabular" ftype="txt" lines_diff="1"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
403 <element name="test_000001" file="test_1.tabular" ftype="txt" lines_diff="1"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
404 </output_collection> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
405 </test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
406 <test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
407 <param name="input" value="test.fasta" ftype="fasta"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
408 <param name="select_ftype" value="generic"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
409 <param name="generic_regex" value="^>.*"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
410 <param name="mode" value="numnew"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
411 <param name="numnew" value="2"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
412 <param name="newfilenames" value="rand"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
413 <param name="allocate" value="random"/> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
414 <param name="seed" value="1010"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
415 <output_collection name="list_output_generic" type="list"> |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
416 <element name="rand_000000" file="rand_0.fasta" ftype="fasta"/> |
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
parents:
2
diff
changeset
|
417 <element name="rand_000001" file="rand_1.fasta" ftype="fasta"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
418 </output_collection> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
419 </test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
420 <test> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
421 <param name="input" value="3_molecules.sdf" ftype="sdf"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
422 <param name="select_ftype" value="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
423 <param name="mode" value="numnew"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
424 <param name="numnew" value="10"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
425 <param name="newfilenames" value="mol"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
426 <param name="allocate" value="batch"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
427 <output_collection name="list_output_sdf" type="list"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
428 <element name="mol_000000.sdf" file="mol_0.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
429 <element name="mol_000001.sdf" file="mol_1.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
430 <element name="mol_000002.sdf" file="mol_2.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
431 </output_collection> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
432 </test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
433 <test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
434 <param name="input" value="3_molecules.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
435 <param name="select_ftype" value="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
436 <param name="mode" value="chunk"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
parents:
3
diff
changeset
|
437 <param name="chunksize" value="1"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
438 <param name="newfilenames" value="mol"/> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
parents:
1
diff
changeset
|
439 <param name="allocate" value="batch"/> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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440 <output_collection name="list_output_sdf" type="list"> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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441 <element name="mol_000000.sdf" file="mol_0.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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442 <element name="mol_000001.sdf" file="mol_1.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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443 <element name="mol_000002.sdf" file="mol_2.sdf" ftype="sdf"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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444 </output_collection> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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445 </test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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446 <test> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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447 <param name="input" value="test.fasta" ftype="fasta"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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448 <param name="select_ftype" value="generic"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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449 <param name="generic_regex" value="^>.*"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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450 <param name="split_after" value="true"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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451 <param name="mode" value="numnew"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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452 <param name="numnew" value="2"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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453 <param name="newfilenames" value="rand"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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454 <param name="allocate" value="random"/> |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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455 <param name="seed" value="1010"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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456 <output_collection name="list_output_generic" type="list"> |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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457 <element name="rand_000001" file="split_after.fasta" ftype="fasta"/> |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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458 </output_collection> |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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459 </test> |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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460 </tests> |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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461 <help><![CDATA[ |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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462 **Split file into a dataset collection** |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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463 |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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464 This tool splits a data set consisting of records into multiple data sets within a collection. |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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465 A record can be for instance simply a line, a FASTA sequence (header + sequence), a FASTQ sequence |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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466 (headers + sequence + qualities), etc. The important property is that the beginning of a new record |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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467 can be specified by a regular expression, e.g. ".*" for lines, ">.*" for FASTA, or "@.*" for FASTQ. |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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468 The tool has presets for text, tabular data sets (which are split by line), FASTA, FASTQ, SDF and MGF. |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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469 For other data types the text delimiting records can be specified manually using the generic splitter. |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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470 If the generic splitter is used, an option is also available to split records either before or after the |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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471 separator. If a preset filetype is used, this is selected automatically (after for SDF, before for all |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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472 others). |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
473 |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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474 If splitting by line (or by some other item, like a FASTA entry or an MGF record), the splitting can be either done alternatingly, in original record order, or at random. |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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475 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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476 If t records are to be distributed to n new data sets, then the i-th record goes to data set |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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477 |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
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478 * floor(i / t * n) (for batch), |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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479 * i % n (for alternating), or |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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480 * a random data set |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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481 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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482 For instance, t=5 records are distributed as follows on n=2 data sets |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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|
483 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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|
484 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
485 i bat alt rand |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
486 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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changeset
|
487 0 0 0 0 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
488 1 0 1 1 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
489 2 0 0 1 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
490 3 1 1 0 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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|
491 4 1 0 0 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
492 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
493 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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494 If the five records are distributed on n=3 data sets: |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
495 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
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|
496 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
497 i bat alt rand |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
498 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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changeset
|
499 0 0 0 0 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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1
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|
500 1 0 1 1 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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changeset
|
501 2 1 2 2 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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changeset
|
502 3 1 0 0 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
503 4 2 1 1 |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
504 = === === ==== |
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
505 |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
506 Note that there are no guarantees when splitting at random that every result file will be non-empty, so downstream tools should be able to gracefully handle empty files. |
2
d150ac3d853d
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 06ffe450bafa280eee8a4331c9cfc9e1ece7c522"
bgruening
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|
507 |
0
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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changeset
|
508 If a tabular file is used as input, you may choose to split by line or by column. If split by column, a new file is created for each unique value in the column. |
de3c2c88e710
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
bgruening
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|
509 In addition, (Python) regular expressions may be used to transform the value in the column to a new value. Caution should be used with this feature, as it could transform all values to the same value, or other unexpected behavior. |
3
2ddc36385d7a
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 8d069684e155d2f5b6fae06d14d98ce41321da53"
bgruening
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|
510 The default regular expression uses each value in the column without modifying it. |
4
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
511 |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
512 Two modes are available for the tool. For the main mode, the number of output files is selected. In this case, records are shared out between this number of files. Alternatively, 'chunking mode' can be selected, which puts a fixed number of records (the 'chunk size') into each output file. |
0850f2dfba13
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
bgruening
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|
513 |
0
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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514 ]]></help> |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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515 <citations> |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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516 <citation type="bibtex"> |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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517 @misc{githubsplit, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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518 author = {Easterly, Caleb}, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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519 year = {2018}, |
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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 872590086696cfbc248519507ecb9063926297ad"
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520 title = {A Galaxy tool for splitting a file into a collection}, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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521 publisher = {GitHub}, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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522 journal = {GitHub repository}, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit c9554ac81af24fc22435750fa4ef8c5c6fc1dc25
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523 url = {https://github.com/bgruening/galaxytools/tools/text_processing/split_file_to_collection}, |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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524 }</citation> |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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525 </citations> |
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/split_file_to_collection commit 85015046a6d8a9dc0f4b54611986676aceeeadd7
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526 </tool> |