annotate unfold_column.xml @ 21:86755160afbf draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit c2b1677d1c94433f777c2dc28ac8eec0a99cc6a7
author bgruening
date Fri, 16 Aug 2024 10:41:54 +0000
parents 12615d397df7
children
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12615d397df7 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 70980e329cd9fa78e74bf14a76fd4ded9bd2b91f
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1 <tool id="tp_unfold_column_tool" name="Unfold" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
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2 <description>columns from a table</description>
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3 <macros>
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4 <import>macros.xml</import>
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5 </macros>
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6 <expand macro="creator"/>
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7 <requirements>
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8 <requirement type="package" version="3.12">python</requirement>
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9 </requirements>
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10 <command>
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11 <![CDATA[
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12 python '$__tool_directory__/unfold_column.py'
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13 '${infile}'
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14 $column
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15 "${delimiter}"
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16 '${outfile}'
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17 ]]>
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18 </command>
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19 <inputs>
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20 <param name="infile" format="tabular" type="data" label="File to unfold" />
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21 <param name="column" type="data_column" data_ref="infile" accept_default="true" label="Column to use for unfolding" />
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22 <param name="delimiter" type="select" label="Values in column are delimited by">
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23 <option value=" ">Whitespace</option>
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24 <option value=".">Dot</option>
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25 <option value=",">Comma</option>
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26 <option value="-">Dash</option>
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27 <option value="_">Underscore</option>
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28 <option value="|">Pipe</option>
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29 <option value=";">Semicolon</option>
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30 </param>
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31 </inputs>
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32 <outputs>
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33 <data name="outfile" format_source="infile" metadata_source="infile" />
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34 </outputs>
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35 <tests>
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36 <test>
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37 <param name="infile" value="unfold_column1.tabular" ftype="tabular"/>
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38 <param name="delimiter" value=" "/>
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39 <param name="column" value="3"/>
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40 <output name="outfile" file="unfold_column_result1.tabular" ftype="tabular"/>
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41 </test>
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42 </tests>
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43 <help>
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44 <![CDATA[
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45 **What it does**
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46
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47 This tool will unfold one column of your input dataset.
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48
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49 -----
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50
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51 Input Example::
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52
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53 a b 1,2,3,4,5 c
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56 Output Example::
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57
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58 a b 1 c
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59 a b 2 c
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60 a b 3 c
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61 a b 4 c
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62 a b 5 c
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64 ]]>
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65 </help>
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66 <expand macro="citations" />
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67 </tool>