Mercurial > repos > bgruening > text_processing
comparison sort_rows.xml @ 19:12615d397df7 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 70980e329cd9fa78e74bf14a76fd4ded9bd2b91f
author | bgruening |
---|---|
date | Thu, 29 Feb 2024 22:15:20 +0000 |
parents | f46f0e4f75c4 |
children | 86755160afbf |
comparison
equal
deleted
inserted
replaced
18:d698c222f354 | 19:12615d397df7 |
---|---|
1 <tool id="tp_sort_rows" name="Sort a row" version="@BASE_VERSION@.0+galaxy0"> | 1 <tool id="tp_sort_rows" name="Sort a row" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> |
2 <description>according to their columns</description> | 2 <description>according to their columns</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="creator"/> | |
7 <requirements> | |
8 <requirement type="package" version="3.12">python</requirement> | |
9 </requirements> | |
6 <command> | 10 <command> |
7 <![CDATA[ | 11 <![CDATA[ |
8 python -c 'for line in ( "\t".join(sorted(line.strip().split("\t"))) for line in open("$infile") ): print(line)' > $outfile | 12 python -c 'for line in ( "\t".join(sorted(line.strip().split("\t"))) for line in open("$infile") ): print(line)' > '$outfile' |
9 ]]> | 13 ]]> |
10 </command> | 14 </command> |
11 <inputs> | 15 <inputs> |
12 <param format="tabular" name="infile" type="data" label="Tabular file that should be sorted"/> | 16 <param format="tabular" name="infile" type="data" label="Tabular file that should be sorted"/> |
13 </inputs> | 17 </inputs> |
29 | 33 |
30 **What it does** | 34 **What it does** |
31 | 35 |
32 That tool sorts each row in a TAB separated file, according to their columns. In other words: It is a sorted reordering of all columns. | 36 That tool sorts each row in a TAB separated file, according to their columns. In other words: It is a sorted reordering of all columns. |
33 | 37 |
34 @REFERENCES@ | |
35 ]]> | 38 ]]> |
36 </help> | 39 </help> |
37 <expand macro="citations" /> | 40 <expand macro="citations" /> |
38 </tool> | 41 </tool> |