Mercurial > repos > bgruening > text_processing
diff replace_text_in_column.xml @ 6:60edf2f8c28f draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit b'e6ee273f75fff61d1e419283fa8088528cf59470\n'
author | bgruening |
---|---|
date | Sat, 06 May 2017 13:09:05 -0400 |
parents | 20344ce0c811 |
children | 74a8bef53a00 |
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--- a/replace_text_in_column.xml Wed Nov 23 15:56:41 2016 -0500 +++ b/replace_text_in_column.xml Sat May 06 13:09:05 2017 -0400 @@ -1,4 +1,4 @@ -<tool id="tp_replace_in_column" name="Replace Text" version="@BASE_VERSION@.0"> +<tool id="tp_replace_in_column" name="Replace Text" version="@BASE_VERSION@.1"> <description>in a specific column</description> <macros> <import>macros.xml</import> @@ -10,7 +10,8 @@ <command> <![CDATA[ awk - -v OFS=" " + -v OFS="\t" + -v FS="\t" --re-interval --sandbox '{ \$$column = gensub( /$find_pattern/, "$replace_pattern", "g", \$$column ) ; print \$0 ; }' "$infile" @@ -132,4 +133,5 @@ @REFERENCES@ ]]> </help> + <expand macro="citations" /> </tool>