diff cat.xml @ 2:616efa22d193 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 369e40078146d00608d52205bb8cee66ae735b76-dirty

--- a/cat.xml	Tue Jun 30 16:23:23 2015 -0400
+++ b/cat.xml	Tue Jun 30 17:47:23 2015 -0400
@@ -11,13 +11,17 @@
     <command>
     <![CDATA[
         cat
-            #for $file in $inputs:
-                "${file}"
+            #echo ' '.join(['"%s"' % $file for $file in $inputs])#
+            #for $q in $queries:
+                #echo ' '.join(['"%s"' % $file for $file in $q.inputs2])#
             #end for
         > $out_file1
     ]]></command>
     <inputs>
-        <param name="inputs" multiple="true" type="data" format="txt" label="datasets to concatenate"/>
+        <param name="inputs" multiple="true" type="data" format="txt" label="Datasets to concatenate"/>
+        <repeat name="queries" title="Dataset">
+            <param name="inputs2" type="data" multiple="True" label="Select" />
+        </repeat>
     </inputs>
     <outputs>
         <data name="out_file1" format_source="inputs" metadata_source="inputs"/>
@@ -27,6 +31,16 @@
             <param name="inputs" value="sort_result1.bed,sort_result2.bed,sort_result3.bed"/>
             <output name="out_file1" file="cat_result1.txt"/>
         </test>
+        <test>
+            <param name="inputs" value="sort_result1.bed,sort_result3.bed"/>
+            <repeat name="queries">
+                <param name="inputs2" value="sort_result3.bed,sort_result3.bed"/>
+            </repeat>
+            <repeat name="queries">
+                <param name="inputs2" value="sort_result3.bed"/>
+            </repeat>
+            <output name="out_file1" file="cat_result2.txt"/>
+        </test>
     </tests>
     <help>
 <![CDATA[