view DEGseq_2.xml @ 8:9c8c0fdb1717 draft

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<tool id="degseq" name="degseq" veision="1.0.0">
  <description>tool for degseq analisis</description>
  <requirements>
    <requirement type="set_environment">SCRIPT_PATH</requirement>
    <requirement type="package" version="3.0.1">R</requirement>
    <requirement type="package" version="1.20.0">degseq</requirement>
  </requirements>


 <command interpreter="perl">DEGseq_2.pl -i $input   -column1 4 -mark1 A -column2 5 -mark2 B
 </command>

  <inputs>
     <param name="input"  type="data" label="input file"/>
  </inputs>

  <outputs>
     <data format="txt" name="deg" from_work_dir="output_score.txt" label="${tool.name} on ${on_string}: deg"/>
  </outputs>
 <help>

 </help>
 </tool>