Mercurial > repos > big-tiandm > degseq

changeset 21:94bc6d663e36 draft

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Uploaded
author big-tiandm
date Sat, 15 Nov 2014 00:58:54 -0500
parents 251c43df4132
children b5b3d44170ca
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Sat Nov 15 00:46:12 2014 -0500
+++ b/tool_dependencies.xml	Sat Nov 15 00:58:54 2014 -0500
@@ -15,6 +15,9 @@
                     </repository>
               </action>
 		      <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action>
+		      <action type="shell_command">RPATH=`which R`</action>
+  		      <action type="shell_command">echo "export PATH=$RPATH:$PATH" \> $INSTALL_DIR/env.sh </action>
+			  <action type="shell_command">chmod 755 SINSTALL_DIR/env.sh </action>
 
 		 </actions>
 		</install>