changeset 12:318617877a10 draft

Uploaded
author big-tiandm
date Wed, 29 Oct 2014 04:19:04 -0400
parents a0222bdfe2ac
children a8c011dc575b
files rfam.pl
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/rfam.pl	Wed Oct 29 04:18:44 2014 -0400
+++ b/rfam.pl	Wed Oct 29 04:19:04 2014 -0400
@@ -42,7 +42,7 @@
 
 #chdir "rfam_match_1397022331";
 ### genome mapping
-`bowtie -v $mis -f -p $threads -k 1 $index $filein --al rfam_mapped.fa --un rfam_not_mapped.fa > rfam_mapped.bwt`;
+`bowtie -v $mis -f -p $threads -k 1 $index $filein --al rfam_mapped.fa --un rfam_not_mapped.fa > rfam_mapped.bwt 2> run.log`;
 
 sub checkACGT{
 	my $string;