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changeset 347:bae19cd2194f draft

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author francesco_lapi
date Thu, 04 Sep 2025 22:25:44 +0000
parents 0ac89744208f
children 25862d166f88
files ._COBRAxy COBRAxy/._.gitignore COBRAxy/._GSOC project submission.html COBRAxy/._README.md COBRAxy/._custom_data_generator.py COBRAxy/._data_tutorial.zip COBRAxy/._flux_simulation.py COBRAxy/._flux_simulation.xml COBRAxy/._flux_to_map.py COBRAxy/._flux_to_map.xml COBRAxy/._local COBRAxy/._marea.py COBRAxy/._marea.xml COBRAxy/._marea_cluster.py COBRAxy/._marea_cluster.xml COBRAxy/._marea_macros.xml COBRAxy/._ras_generator.py COBRAxy/._ras_generator.xml COBRAxy/._ras_to_bounds.py COBRAxy/._ras_to_bounds.xml COBRAxy/._rps_generator.py COBRAxy/._rps_generator.xml COBRAxy/._testing.py COBRAxy/._utils COBRAxy/local/._ENGRO2_rules.csv COBRAxy/local/._medium COBRAxy/local/._models COBRAxy/local/._pickle files COBRAxy/local/._readme.txt COBRAxy/local/._svg metabolic maps COBRAxy/local/medium/._medium.csv COBRAxy/local/models/._ENGRO2.xml COBRAxy/local/pickle files/._ENGRO2_genes.p COBRAxy/local/pickle files/._ENGRO2_genes.pickle COBRAxy/local/pickle files/._ENGRO2_rules.p COBRAxy/local/pickle files/._HMRcore_genes.p COBRAxy/local/pickle files/._HMRcore_genes.pickle COBRAxy/local/pickle files/._HMRcore_rules.p COBRAxy/local/pickle files/._RECON_genes.pickle COBRAxy/local/pickle files/._Recon_genes.p COBRAxy/local/pickle files/._Recon_rules.p COBRAxy/local/pickle files/._black_list.pickle COBRAxy/local/pickle files/._reactions.pickle COBRAxy/local/pickle files/._substrate_frequencies.pickle COBRAxy/local/pickle files/._synonyms.pickle COBRAxy/local/pickle files/._synonyms_dict_recon_keys_filtered.pkl COBRAxy/local/svg metabolic maps/._ENGRO2_map.svg COBRAxy/local/svg metabolic maps/._ENGRO2_no_legend_map.svg COBRAxy/local/svg metabolic maps/._HMRcore_map.svg COBRAxy/local/svg metabolic maps/._HMRcore_no_legend_map.svg COBRAxy/utils/._CBS_backend.py COBRAxy/utils/.___init__.py COBRAxy/utils/._general_utils.py COBRAxy/utils/._reaction_parsing.py COBRAxy/utils/._rule_parsing.py
diffstat 55 files changed, 0 insertions(+), 0 deletions(-) [+]
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Binary file ._COBRAxy has changed
Binary file COBRAxy/._.gitignore has changed
Binary file COBRAxy/._GSOC project submission.html has changed
Binary file COBRAxy/._README.md has changed
Binary file COBRAxy/._custom_data_generator.py has changed
Binary file COBRAxy/._data_tutorial.zip has changed
Binary file COBRAxy/._flux_simulation.py has changed
Binary file COBRAxy/._flux_simulation.xml has changed
Binary file COBRAxy/._flux_to_map.py has changed
Binary file COBRAxy/._flux_to_map.xml has changed
Binary file COBRAxy/._local has changed
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Binary file COBRAxy/._marea.xml has changed
Binary file COBRAxy/._marea_cluster.py has changed
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Binary file COBRAxy/._ras_generator.py has changed
Binary file COBRAxy/._ras_generator.xml has changed
Binary file COBRAxy/._ras_to_bounds.py has changed
Binary file COBRAxy/._ras_to_bounds.xml has changed
Binary file COBRAxy/._rps_generator.py has changed
Binary file COBRAxy/._rps_generator.xml has changed
Binary file COBRAxy/._testing.py has changed
Binary file COBRAxy/._utils has changed
Binary file COBRAxy/local/._ENGRO2_rules.csv has changed
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Binary file COBRAxy/local/._pickle files has changed
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Binary file COBRAxy/local/._svg metabolic maps has changed
Binary file COBRAxy/local/medium/._medium.csv has changed
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Binary file COBRAxy/local/pickle files/._ENGRO2_genes.p has changed
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Binary file COBRAxy/local/pickle files/._reactions.pickle has changed
Binary file COBRAxy/local/pickle files/._substrate_frequencies.pickle has changed
Binary file COBRAxy/local/pickle files/._synonyms.pickle has changed
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Binary file COBRAxy/local/svg metabolic maps/._ENGRO2_map.svg has changed
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Binary file COBRAxy/local/svg metabolic maps/._HMRcore_map.svg has changed
Binary file COBRAxy/local/svg metabolic maps/._HMRcore_no_legend_map.svg has changed
Binary file COBRAxy/utils/._CBS_backend.py has changed
Binary file COBRAxy/utils/.___init__.py has changed
Binary file COBRAxy/utils/._general_utils.py has changed
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