Mercurial > repos > bimib > cobraxy

changeset 534:ef1b8ed68e9e draft

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Uploaded
author francesco_lapi
date Sat, 25 Oct 2025 10:52:53 +0000
parents ddb83aae406b
children 3266da9d0404
files COBRAxy/metabolicModel2Tabular.xml
diffstat 1 files changed, 4 insertions(+), 15 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/metabolicModel2Tabular.xml	Sat Oct 25 10:43:12 2025 +0000
+++ b/COBRAxy/metabolicModel2Tabular.xml	Sat Oct 25 10:52:53 2025 +0000
@@ -94,27 +94,16 @@
     <outputs>
         <data name="log" format="txt" label="MetabolicModelSetting - Log" />
         
-        <data name="out_tabular_engro2" format="tabular" 
-              label="ENGRO2_model_tabular" 
-              from_work_dir="output_model.tabular">
+        <data name="out_tabular_engro2" format="tabular" label="ENGRO2_model_tabular">
             <filter>cond_model['model_selector'] == 'ENGRO2'</filter>
         </data>
         
-        <data name="out_tabular_recon" format="tabular" 
-              label="Recon_model_tabular" 
-              from_work_dir="output_model.tabular">
+        <data name="out_tabular_recon" format="tabular" label="Recon_model_tabular">
             <filter>cond_model['model_selector'] == 'Recon'</filter>
         </data>
-        
-        <data name="out_tabular_custom" format="tabular" 
-            label="Custom_model_tabular" 
-            from_work_dir="output_model.tabular">
+
+        <data name="out_tabular_custom" format="tabular" label="Custom_model_tabular">
             <filter>cond_model['model_selector'] == 'Custom_model'</filter>
-
-            <change_format>
-                <when input="cond_model.input" format="json" 
-                    value="json" label_from_dataset="cond_model.input" />
-            </change_format>
         </data>
     </outputs>