Mercurial > repos > bimib > marea_2

changeset 361:86f6eff18ea8 draft

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Uploaded
author luca_milaz
date Wed, 18 Sep 2024 09:12:38 +0000
parents f847aea6311a
children cee894a3e41c
files marea_2/custom_data_generator.xml
diffstat 1 files changed, 2 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/marea_2/custom_data_generator.xml	Wed Sep 18 09:12:05 2024 +0000
+++ b/marea_2/custom_data_generator.xml	Wed Sep 18 09:12:38 2024 +0000
@@ -43,7 +43,8 @@
 What it does
 -------------
 
-This tool generates four files containing reactions, rules, bounds and growth medium, starting from a custom model in JSON or XML format, that can be used as inputs for the RAS and RPS generator modules.
+This tool generates two files containing reactions and rules respectively, starting from a custom model in JSON or XML format, that can be used as inputs for the RAS and RPS generator modules.
+
 Accepted files:
     - A model: JSON or XML file reporting reactions and rules contained in the model.   
 
@@ -54,8 +55,6 @@
 The tool generates:
     - rules: reporting the rules for each reaction in the custom model given. Format: csv or pickle.
     - reactions: reporting the reactions in the custom model given. Format: csv or pickle.
-    - bounds: reporting the lower and upper bounds of custom model. Format: csv or pickle.
-    - medium: reporting a simple list containing the model exchange reactions. Format: csv or pickle.
     - a log file (.txt).
     ]]>
     </help>