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author luca_milaz
date Mon, 08 Jul 2024 22:18:11 +0000
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1 # Official repository for the MaREA toolset
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2 > MaREA (Metabolic Reaction Enrichment Analysis) is a user-friendly tool that allows a user to characterize and to graphically compare groups of samples with different transcriptional regulation of metabolism,
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3 as estimated from cross-sectional RNA-seq data. The tool is available as plug-in for the widely-used Galaxy platform for comparative genomics and bioinformatics analyses.
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5 ## Useful links:
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6 - Paper: https://pubmed.ncbi.nlm.nih.gov/32373287/
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7 - MaREA4Galaxy: https://galaxyproject.org/use/marea4galaxy/
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8 - Galaxy project: https://usegalaxy.org/
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10 ## Documentation:
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11 - marea : https://colab.research.google.com/drive/1E77uGwqimuTioP7Ss_2yyXZ82XTGnA4i
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12 - ras_generator : https://colab.research.google.com/drive/1J3jQxe4DveDC59ZHTgt6n1BpX_g3FLLB
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13 - rps_generator : https://colab.research.google.com/drive/1MTLXhqceZNvis0El3Wh2vjRbWL6vpOW7
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14 - marea_cluster : https://colab.research.google.com/drive/15tLssgX9UHsbptNaBMwhAkfuyPdenxQX
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15 - testing : https://colab.research.google.com/drive/1QQZNwClUT8gvDMg8F9HIhS-Nmq6FvSzE
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16 - custom_data_generator : https://colab.research.google.com/drive/1mkbCjf4w7fcB9Qbtp7Y_N9wYLvD3S54b