Mercurial > repos > bioitcore > transcriptomics_easy_for_discovery_toolkit
changeset 8:a219dbdee76d draft
planemo upload
| author | bioitcore |
|---|---|
| date | Fri, 10 Nov 2017 11:02:17 -0500 |
| parents | 35e7ef84226f |
| children | 03725d17ae02 |
| files | join_to_reference_gene_interactions/easyjoin_preset.xml join_to_reference_gene_interactions/macros.xml join_to_reference_transcripts/easyjoin_2_preset.xml join_to_reference_transcripts/macros.xml |
| diffstat | 4 files changed, 2 insertions(+), 76 deletions(-) [+] |
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--- a/join_to_reference_gene_interactions/easyjoin_preset.xml Fri Nov 10 10:55:05 2017 -0500 +++ b/join_to_reference_gene_interactions/easyjoin_preset.xml Fri Nov 10 11:02:17 2017 -0500 @@ -1,4 +1,4 @@ -<tool id="tp_easyjoin_tool" name="Join to Reference Gene Interactions" version="@BASE_VERSION@.0"> +<tool id="join_r_g_i_tool" name="Join to Reference Gene Interactions" version="1.0.0"> <description></description> <version_command>join --version | head -n 1</version_command> <command>
--- a/join_to_reference_gene_interactions/macros.xml Fri Nov 10 10:55:05 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,37 +0,0 @@ -<macros> - <xml name="requirements"> - <requirements> - <requirement type="package" version="8.25">coreutils</requirement> - <yield/> - </requirements> - </xml> - <token name="@BASE_VERSION@">1.1</token> - <xml name="stdio"> - <stdio> - <!-- Anything other than zero is an error --> - <exit_code range="1:" /> - <exit_code range=":-1" /> - <!-- In case the return code has not been set propery check stderr too --> - <regex match="Error:" /> - <regex match="Exception:" /> - </stdio> - </xml> - <token name="@REFERENCES@"> -<![CDATA[ ------- - -**Citation** - -If you use this tool in Galaxy, please cite: - -Bjoern A. Gruening (2014), `Galaxy wrapper <https://github.com/bgruening/galaxytools>`_ - -Assaf Gordon (gordon <at> cshl dot edu) -]]> - </token> - <xml name="citations"> - <citations> - <yield /> - </citations> - </xml> -</macros>
--- a/join_to_reference_transcripts/easyjoin_2_preset.xml Fri Nov 10 10:55:05 2017 -0500 +++ b/join_to_reference_transcripts/easyjoin_2_preset.xml Fri Nov 10 11:02:17 2017 -0500 @@ -1,4 +1,4 @@ -<tool id="tp_easyjoin_tool" name="Join to Reference Gene Transcripts" version="@BASE_VERSION@.0"> +<tool id="join_ref_gene_tool" name="Join to Reference Gene Transcripts" version="1.0.0"> <version_command>join --version | head -n 1</version_command> <command> <![CDATA[
--- a/join_to_reference_transcripts/macros.xml Fri Nov 10 10:55:05 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,37 +0,0 @@ -<macros> - <xml name="requirements"> - <requirements> - <requirement type="package" version="8.25">coreutils</requirement> - <yield/> - </requirements> - </xml> - <token name="@BASE_VERSION@">1.1</token> - <xml name="stdio"> - <stdio> - <!-- Anything other than zero is an error --> - <exit_code range="1:" /> - <exit_code range=":-1" /> - <!-- In case the return code has not been set propery check stderr too --> - <regex match="Error:" /> - <regex match="Exception:" /> - </stdio> - </xml> - <token name="@REFERENCES@"> -<![CDATA[ ------- - -**Citation** - -If you use this tool in Galaxy, please cite: - -Bjoern A. Gruening (2014), `Galaxy wrapper <https://github.com/bgruening/galaxytools>`_ - -Assaf Gordon (gordon <at> cshl dot edu) -]]> - </token> - <xml name="citations"> - <citations> - <yield /> - </citations> - </xml> -</macros>