Mercurial > repos > biomonika > linkyx
view reformat_trinity_header.xml @ 1:4c5de3a2c54e
toolshed2
author | biomonika <biomonika@psu.edu> |
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date | Sun, 07 Sep 2014 23:12:26 -0400 |
parents | 05c27700e5ca |
children |
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<tool id="reformat_trinity_header" name="reformat_trinity_header"> <description>Reformat Trinity header</description> <requirements> <requirement type="set_environment">LINKYX_PATH</requirement> <requirement type="set_environment">SAMTOOLS</requirement> <requirement type="package" version="0.1.19">samtools</requirement> </requirements> <command interpreter="bash">reformat_trinity_header.sh $output $input1</command> <inputs> <param format="fasta" name="input1" type="data" label="Trinity.fasta"/> </inputs> <outputs> <data format="fasta" name="output" /> </outputs> <tests> <test> <output name="out_file1" file="Trinity.fasta"/> </test> </tests> <help> Reformat Trinity header, keep only part until first space. </help> </tool>