Mercurial > repos > bornea > prohits_dotplot_generator
view toolshed_version/ProHits_DotPlot_Generator.xml @ 7:59e57834c366 draft
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author | bornea |
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date | Tue, 15 Mar 2016 15:30:44 -0400 |
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<tool id="ProHits_DotPlot_Generator" name="ProHits DotPlot Generator"> <description></description> <command interpreter="python">ProHits_DotPlot_Generator.py $saint_file $FDR1 $FDR2 $spec_max $dotplot $heatmap $estimated $stats</command> <inputs> <param format="txt" name="saint_file" type="data" label="SAINT Output"/> <param type="float" name="FDR1" label="False Discovery Rate 1" value="0.01"/> <param type="float" name="FDR2" label="False Discovery Rate 2" value="0.025"/> <param type="integer" name="spec_max" label="Maximum spectral count" value="50"/> </inputs> <outputs> <data format="pdf" name="dotplot" label="DotPlot" /> <data format="pdf" name="heatmap" label="Heatmap" /> <data format="pdf" name="estimated" label="Estimated" /> <data format="pdf" name="stats" label="Stats" /> </outputs> <stdio> <regex match="error" source="stdout" level="fatal" description="Unknown error"/> </stdio> <tests> <test> <param name="input" value="fa_gc_content_input.fa"/> <output name="out_file1" file="fa_gc_content_output.txt"/> </test> </tests> <help> </help> </tool>