Mercurial > repos > bornea > saint_preprocessing

changeset 31:761e1ad2b130 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bornea
date Tue, 26 Apr 2016 16:21:13 -0400
parents e6e456d3ac14
children 63008bdf576e
files SAINT_preprocessing_mq_pep.py
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/SAINT_preprocessing_mq_pep.py	Tue Apr 26 16:16:56 2016 -0400
+++ b/SAINT_preprocessing_mq_pep.py	Tue Apr 26 16:21:13 2016 -0400
@@ -40,9 +40,10 @@
     os.system(cmd)
 else:
     cmd = (r"Rscript "+ str(ins_path) +"pre_process_protein_name_set.R " + str(mq_file) +
-        " " + str(fasta_db)
+        " " + str(fasta_db))
     os.system(cmd)
 
+
 infile = "./tukeys_output.txt" 
 # The MaxQuant "Samples Report" output.
 prey = sys.argv[2]