Mercurial > repos > brenninc > sync_paired_end_reads

comparison syncpairs.xml @ 1:622f0b43ce57 draft

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author brenninc
date Mon, 09 May 2016 08:31:12 -0400
parents 79682a423af7
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0:79682a423af7 1:622f0b43ce57
26 <param name="reads2" value="C75_S29_R2_001.fastq" ftype="fastq" /> 26 <param name="reads2" value="C75_S29_R2_001.fastq" ftype="fastq" />
27 <output name="reads1_output" file="C75_S29_R1_001_extracted.fastq" ftype="fastq" /> 27 <output name="reads1_output" file="C75_S29_R1_001_extracted.fastq" ftype="fastq" />
28 <output name="reads2_output" file="C75_S29_R2_001_extracted.fastq" ftype="fastq" /> 28 <output name="reads2_output" file="C75_S29_R2_001_extracted.fastq" ftype="fastq" />
29 </test--> 29 </test-->
30 <test> 30 <test>
31 <param name="reads1" value="read1.fq" ftype="fastq" /> 31 <param name="reads1" value="read1.fq" ftype="fastqsanger" />
32 <param name="reads2" value="read2.fastq" ftype="fastq" /> 32 <param name="reads2" value="read2.fastq" ftype="fastqsanger" />
33 <output name="reads1_output" file="read1_extracted.fastq" ftype="fastq" /> 33 <output name="reads1_output" file="read1_extracted.fastq" ftype="fastqsanger" />
34 <output name="reads2_output" file="read2_extracted.fastq" ftype="fastq" /> 34 <output name="reads2_output" file="read2_extracted.fastq" ftype="fastqsanger" />
35 </test> 35 </test>
36 </tests> 36 </tests>
37 <help> 37 <help>
38 <![CDATA[ 38 <![CDATA[
39 Description taken from source: https://github.com/mmendez12/sync_paired_end_reads 39 Description taken from source: https://github.com/mmendez12/sync_paired_end_reads