Mercurial > repos > brenninc > sync_paired_end_reads

diff syncpairs.xml @ 1:622f0b43ce57 draft

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Uploaded
author brenninc
date Mon, 09 May 2016 08:31:12 -0400
parents 79682a423af7
children
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--- a/syncpairs.xml	Mon May 09 05:15:01 2016 -0400
+++ b/syncpairs.xml	Mon May 09 08:31:12 2016 -0400
@@ -28,10 +28,10 @@
             <output name="reads2_output" file="C75_S29_R2_001_extracted.fastq" ftype="fastq" />
         </test-->
         <test>
-            <param name="reads1" value="read1.fq" ftype="fastq" /> 
-            <param name="reads2" value="read2.fastq" ftype="fastq" /> 
-            <output name="reads1_output" file="read1_extracted.fastq" ftype="fastq" />
-            <output name="reads2_output" file="read2_extracted.fastq" ftype="fastq" />
+            <param name="reads1" value="read1.fq" ftype="fastqsanger" /> 
+            <param name="reads2" value="read2.fastq" ftype="fastqsanger" /> 
+            <output name="reads1_output" file="read1_extracted.fastq" ftype="fastqsanger" />
+            <output name="reads2_output" file="read2_extracted.fastq" ftype="fastqsanger" />
         </test>
     </tests>
     <help>