Mercurial > repos > brinkmanlab > sendmail
comparison sendmail.xml @ 0:126f37fe9f20 draft default tip
"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/sendmail commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e"
author | brinkmanlab |
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date | Fri, 24 Jan 2020 17:47:27 -0500 |
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-1:000000000000 | 0:126f37fe9f20 |
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1 <tool id="sendmail" name="Send Email" version="1.0" profile="16.04"> | |
2 <description>Send mail using templates and include information about datasets</description> | |
3 <command><![CDATA[ | |
4 #from galaxy.util import send_mail | |
5 $send_mail($__app__.config.email_from, $to, $subject, "", $__app__.config, open($body).read()) | |
6 ]]></command> | |
7 <configfiles> | |
8 <configfile name="body"><![CDATA[ | |
9 #set $template_path = '/'.join([$__tool_data_path__, "sendmail", $template]) | |
10 #import os | |
11 #if '..' not in $template and $os.path.isfile($template_path) | |
12 #include $template_path | |
13 #else | |
14 <html> | |
15 <body> | |
16 $data.name is now complete. | |
17 #if $hasattr(__app__.config, "public_url") | |
18 You can view it <a href="${__app__.config.public_url}/datasets/${data.dataset.id}/display">here</a>. | |
19 #end if | |
20 </body> | |
21 </html> | |
22 #end if | |
23 ]]></configfile> | |
24 </configfiles> | |
25 <inputs> | |
26 <param name="data" type="data" format="data" multiple="true" label="Data" /> | |
27 <param name="to" type="text" label="To" /> | |
28 <param name="subject" type="text" value="Job complete" label="Subject" /> | |
29 <repeat name="extras" title="Extras"> | |
30 <param name="extra" type="text" label="Extra data to make available in the template body" /> | |
31 </repeat> | |
32 <param name="template" type="text" value="template.html" label="Template" help="Relative path of template to use in tool-data/sendmail/" /> | |
33 </inputs> | |
34 <help><![CDATA[ | |
35 Send mail using templates and include information about datasets. | |
36 | |
37 Templates are parsed using Galaxies Cheeta Template Engine. The variables available are everything that is available to a tool including: | |
38 - $data Dataset instance passed to the tool input | |
39 - $to Reciepent address specified in the tool parameters | |
40 - $subject Subject specified in the tool parameters | |
41 - $extras[].extra List of extras specified in the tool parameters | |
42 - $template Relative path to the current template | |
43 | |
44 See this tools xml for an example template. | |
45 ]]></help> | |
46 <citations> | |
47 <citation type="doi">10.5281/zenodo.3364789</citation> | |
48 </citations> | |
49 </tool> |