Mercurial > repos > brinkmanlab > sendmail
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"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/sendmail commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e"
author | brinkmanlab |
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date | Fri, 24 Jan 2020 17:47:27 -0500 |
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<tool id="sendmail" name="Send Email" version="1.0" profile="16.04"> <description>Send mail using templates and include information about datasets</description> <command><![CDATA[ #from galaxy.util import send_mail $send_mail($__app__.config.email_from, $to, $subject, "", $__app__.config, open($body).read()) ]]></command> <configfiles> <configfile name="body"><![CDATA[ #set $template_path = '/'.join([$__tool_data_path__, "sendmail", $template]) #import os #if '..' not in $template and $os.path.isfile($template_path) #include $template_path #else <html> <body> $data.name is now complete. #if $hasattr(__app__.config, "public_url") You can view it <a href="${__app__.config.public_url}/datasets/${data.dataset.id}/display">here</a>. #end if </body> </html> #end if ]]></configfile> </configfiles> <inputs> <param name="data" type="data" format="data" multiple="true" label="Data" /> <param name="to" type="text" label="To" /> <param name="subject" type="text" value="Job complete" label="Subject" /> <repeat name="extras" title="Extras"> <param name="extra" type="text" label="Extra data to make available in the template body" /> </repeat> <param name="template" type="text" value="template.html" label="Template" help="Relative path of template to use in tool-data/sendmail/" /> </inputs> <help><![CDATA[ Send mail using templates and include information about datasets. Templates are parsed using Galaxies Cheeta Template Engine. The variables available are everything that is available to a tool including: - $data Dataset instance passed to the tool input - $to Reciepent address specified in the tool parameters - $subject Subject specified in the tool parameters - $extras[].extra List of extras specified in the tool parameters - $template Relative path to the current template See this tools xml for an example template. ]]></help> <citations> <citation type="doi">10.5281/zenodo.3364789</citation> </citations> </tool>