Mercurial > repos > card > rgi
changeset 1:f96cbb663aa9 draft
planemo upload for repository https://github.com/arpcard/rgi commit 09a75bd2d655c05892acf7585a7ed08548f1c86d
| author | card |
|---|---|
| date | Fri, 28 Feb 2020 13:38:11 -0500 |
| parents | 715bc9aeef69 |
| children | a671367c326e |
| files | data_managers/data_manager_rgi_build_db/data_manager/rgi_database_builder.xml rgi.xml |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/data_managers/data_manager_rgi_build_db/data_manager/rgi_database_builder.xml Wed Feb 27 09:08:21 2019 -0500 +++ b/data_managers/data_manager_rgi_build_db/data_manager/rgi_database_builder.xml Fri Feb 28 13:38:11 2020 -0500 @@ -2,7 +2,7 @@ <tool id="rgi_database_builder" name="RGI Database Builder" tool_type="manage_data" version="1.0.0"> <description>Download and build the CARD database for RGI</description> <requirements> - <requirement type="package" version="4.2.2">rgi</requirement> + <requirement type="package" version="5.1.0">rgi</requirement> </requirements> <stdio> <exit_code description="Error" level="fatal" range="1:" />
--- a/rgi.xml Wed Feb 27 09:08:21 2019 -0500 +++ b/rgi.xml Fri Feb 28 13:38:11 2020 -0500 @@ -1,12 +1,12 @@ -<tool id="rgi" name="Resistance Gene Identifier (RGI)" version="4.2.2"> +<tool id="rgi" name="Resistance Gene Identifier (RGI)" version="5.1.0"> <description>This tool predicts resistome(s) from protein or nucleotide data based on homology and SNP models.</description> <requirements> - <requirement type="package" version="4.2.2">rgi</requirement> + <requirement type="package" version="5.1.0">rgi</requirement> </requirements> <stdio> <exit_code range="1:" /> </stdio> - <command><![CDATA[ + <command detect_errors="aggressive"><![CDATA[ #if $db_opts.db_opts_selector != "default": rgi load #if $db_opts.db_opts_selector == "local":