Mercurial > repos > chemteam > mdanalysis_hbonds
annotate macros.xml @ 1:5c38e38dbc35 draft
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
author | chemteam |
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date | Mon, 07 Oct 2019 12:51:36 -0400 |
parents | 469ad3ea5a5f |
children | 4c36f5ad2799 |
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469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
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changeset
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1 <macros> |
1
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
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2 <token name="@VERSION@">0.20</token> |
0
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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3 <xml name="requirements"> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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4 <requirements> |
1
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
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5 <requirement type="package" version="0.20.1">mdanalysis</requirement> |
0
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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6 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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7 </requirements> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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8 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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9 <xml name="analysis_inputs"> |
1
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
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changeset
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10 <param format="dcd,xtc" name="trajin" type="data" label="DCD/XTC trajectory input"/> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
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changeset
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11 <param format="pdb,gro" name="strin" type="data" label="PDB/GRO input"/> |
0
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
12 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
13 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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14 <xml name="sanitizer"> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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15 <sanitizer invalid_char=""> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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16 <valid initial="string.ascii_letters,string.digits"/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
17 </sanitizer> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
18 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
19 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
20 <xml name="sanitizer_resids"> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
21 <sanitizer invalid_char=""> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
22 <valid initial="string.digits"/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
23 </sanitizer> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
24 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
|
25 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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26 <xml name="tests_inputs"> |
1
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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27 <param name="trajin" value="test.dcd" ftype="dcd"/> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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28 <param name="strin" value="test.pdb" ftype="pdb"/> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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29 <yield/> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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30 </xml> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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31 <xml name="tests_inputs_gmx"> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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32 <param name="trajin" value="test.xtc" ftype="xtc"/> |
5c38e38dbc35
"planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3b99f08f22b9e0c16c0a0adc82f8c16c1a25cedf"
chemteam
parents:
0
diff
changeset
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33 <param name="strin" value="test.gro" ftype="gro"/> |
0
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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34 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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35 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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36 <xml name="citations"> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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37 <citations> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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38 <citation type="doi">10.1093/bioinformatics/btz107</citation> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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39 <citation type="doi">10.1002/jcc.21787</citation> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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40 <yield/> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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41 </citations> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
changeset
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42 </xml> |
469ad3ea5a5f
planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 3ff06e3182c3a1546ea0a3b29e0d4383e12169e1
chemteam
parents:
diff
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43 </macros> |