Mercurial > repos > chmaramis > irprofiler

annotate test-data/gene_usage_geneV_TCR_input1.csv @ 1:acaa8e8a0b88 draft default tip

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Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
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acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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1 V-GENE AA JUNCTION Reads Reads/Total Frequency %
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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2 1 TRBV2 CASSSTDTQYF 3545 3545/56731 6.2488
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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3 2 TRBV2 CASRLVPDTQYF 2893 2893/56731 5.0995
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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4 3 TRBV13 CASSLSGNTEAFF 670 670/56731 1.181
acaa8e8a0b88 Uploaded test-data & added tool help
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5 4 TRBV27 CASSSFDEQFF 544 544/56731 0.9589
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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6 5 TRBV2 CASSEGGWTEAFF 398 398/56731 0.7016
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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7 6 TRBV5-1 CASSPGSTDTQYF 329 329/56731 0.5799
acaa8e8a0b88 Uploaded test-data & added tool help
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8 7 TRBV2 CASSEIGQGANEQFF 201 201/56731 0.3543
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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9 8 TRBV10-2 CASSVLGVMNTEAFF 181 181/56731 0.319
acaa8e8a0b88 Uploaded test-data & added tool help
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10 9 TRBV20-1 CSAFLGGTQFF 104 104/56731 0.1833
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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11 10 TRBV12-3 or TRBV12-4 CASSRTETQYF 94 94/56731 0.1657
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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12 11 TRBV12-3 or TRBV12-4 CASSSRDPLNTEAFF 84 84/56731 0.1481
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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13 12 TRBV2 CASMGGLNIYNSPLHF 77 77/56731 0.1357
acaa8e8a0b88 Uploaded test-data & added tool help
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14 13 TRBV25-1 CASSEHGRAAEAFF 72 72/56731 0.1269
acaa8e8a0b88 Uploaded test-data & added tool help
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15 14 TRBV9 CASSVRRYSNQPQHF 69 69/56731 0.1216
acaa8e8a0b88 Uploaded test-data & added tool help
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16 15 TRBV20-1 CSASRGEEAFF 69 69/56731 0.1216
acaa8e8a0b88 Uploaded test-data & added tool help
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17 16 TRBV2 CASSKSGGAFNEQFF 62 62/56731 0.1093
acaa8e8a0b88 Uploaded test-data & added tool help
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18 17 TRBV27 CASSLIPGQYQYF 59 59/56731 0.104
acaa8e8a0b88 Uploaded test-data & added tool help
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19 18 TRBV7-8 CASSFRTGFTDTQYF 55 55/56731 0.0969
acaa8e8a0b88 Uploaded test-data & added tool help
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20 19 TRBV10-2 CASSEMGNEQFF 52 52/56731 0.0917
acaa8e8a0b88 Uploaded test-data & added tool help
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21 20 TRBV25-1 CASSVTGYEQFF 49 49/56731 0.0864