Mercurial > repos > chmaramis > irprofiler

view test-data/exclusive_clonos_def2_TCR_input2.csv @ 1:acaa8e8a0b88 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
parents
children
line wrap: on
line source

	V-GENE	AA JUNCTION	Reads	Reads/Total	Frequency %
1	TRBV2	CASRLVPDTQYF	2931	2931/57218	5.1225
2	TRBV13	CASSLSGNTEAFF	753	753/57218	1.316
3	TRBV27	CASSSFDEQFF	544	544/57218	0.9507
4	TRBV5-1	CASSPGSTDTQYF	322	322/57218	0.5628
5	TRBV10-2	CASSVLGVMNTEAFF	181	181/57218	0.3163
6	TRBV20-1	CSAFLGGTQFF	107	107/57218	0.187
7	TRBV12-3 or TRBV12-4	CASSRTETQYF	94	94/57218	0.1643
8	TRBV2	CASMGGLNIYNSPLHF	77	77/57218	0.1346
9	TRBV25-1	CASSEHGRAAEAFF	74	74/57218	0.1293
10	TRBV9	CASSVRRYSNQPQHF	69	69/57218	0.1206
11	TRBV2	CASSKSGGAFNEQFF	62	62/57218	0.1084
12	TRBV7-8	CASSFRTGFTDTQYF	55	55/57218	0.0961
13	TRBV25-1	CASSVTGYEQFF	49	49/57218	0.0856
14	TRBV10-3 or TRBV6-1 or TRBV6-4 or TRBV6-5 or TRBV6-6	CASSYMSSGSEQYF	47	47/57218	0.0821
15	TRBV20-1	CSANRGEEAFF	45	45/57218	0.0786
16	TRBV29-1	CSVGSGEGYEQYF	44	44/57218	0.0769
17	TRBV12-3 or TRBV12-4	CASSPGTAEAFF	42	42/57218	0.0734
18	TRBV7-9	CASSSPYANNEQFF	41	41/57218	0.0717
19	TRBV25-1	CASSASGYEQYF	40	40/57218	0.0699
20	TRBV12-3 or TRBV12-4	CASSRQIEAEAFF	38	38/57218	0.0664