changeset 4:d1896971200b draft

planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/workflows/amrplusplus commit 9e86c4ae3eb19f5c493ac96f86c6235ab3df5368
author chrisd
date Sun, 27 Mar 2016 02:42:55 -0400
parents 2b8f8d1900fa
children 04f9c20fecf8
files README.rst amrplusplus_pe.ga amrplusplus_wf.ga repository_dependencies.xml
diffstat 4 files changed, 549 insertions(+), 549 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Thu Mar 24 05:03:51 2016 -0400
+++ b/README.rst	Sun Mar 27 02:42:55 2016 -0400
@@ -1,7 +1,7 @@
 What is this?
 =============
 
-This is a suite that contains a collection of tools which can be used to analyze diverse microbial populations.
+This is a suite that contains a collection of tools which can be used to analyze metagenomic sequence data.
 
 Availability
 ============
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/amrplusplus_pe.ga	Sun Mar 27 02:42:55 2016 -0400
@@ -0,0 +1,547 @@
+{
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+    "annotation": "", 
+    "format-version": "0.1", 
+    "name": "amrplusplus_wf_pe", 
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+            "inputs": [
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+                    "name": "Input Dataset"
+                }
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+            "label": "AMR Database", 
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+                "top": 200
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+            "tool_id": null, 
+            "tool_state": "{\"name\": \"Input Dataset\"}", 
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+            "workflow_outputs": []
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+            "inputs": [
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+                    "name": "Input Dataset"
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+            "label": "Host Genome", 
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+            "outputs": [], 
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+                "top": 285
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+            "tool_id": null, 
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+            "tool_errors": null, 
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/chrisd/coverage_sampler/gene_fraction/0.1.0", 
+            "tool_state": "{\"input2\": \"null\", \"__page__\": 0, \"input1\": \"null\", \"min\": \"\\\"5\\\"\", \"max\": \"\\\"100\\\"\", \"__rerun_remap_job_id__\": null, \"samples\": \"\\\"1\\\"\", \"skip\": \"\\\"5\\\"\", \"threshold\": \"\\\"80\\\"\"}", 
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+            "type": "tool", 
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+            "inputs": [], 
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+            "position": {
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+            "post_job_actions": {
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+            "tool_id": "toolshed.g2.bx.psu.edu/repos/chrisd/snipfinder/snp_caller/0.1.0", 
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+            "tool_version": "0.1.0", 
+            "type": "tool", 
+            "uuid": "b7bac673-aed8-4abd-a873-f842b9497ac8", 
+            "workflow_outputs": [
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+            ]
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+    }, 
+    "uuid": "6c6ee2ed-be38-4787-9a8e-5ab9a872a00e"
+}
\ No newline at end of file
--- a/amrplusplus_wf.ga	Thu Mar 24 05:03:51 2016 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,547 +0,0 @@
-{
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-    "annotation": "", 
-    "format-version": "0.1", 
-    "name": "amrplusplus_wf_pe", 
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-            "annotation": "", 
-            "content_id": null, 
-            "id": 0, 
-            "input_connections": {}, 
-            "inputs": [
-                {
-                    "description": "", 
-                    "name": "Input Dataset"
-                }
-            ], 
-            "label": "AMR Database", 
-            "name": "Input dataset", 
-            "outputs": [], 
-            "position": {
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-                "top": 200
-            }, 
-            "tool_errors": null, 
-            "tool_id": null, 
-            "tool_state": "{\"name\": \"Input Dataset\"}", 
-            "tool_version": null, 
-            "type": "data_input", 
-            "uuid": "c33b3302-86dd-4020-920b-e91904994b0b", 
-            "workflow_outputs": []
-        }, 
-        "1": {
-            "annotation": "", 
-            "content_id": null, 
-            "id": 1, 
-            "input_connections": {}, 
-            "inputs": [
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-                    "name": "Input Dataset"
-                }
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--- a/repository_dependencies.xml	Thu Mar 24 05:03:51 2016 -0400
+++ b/repository_dependencies.xml	Sun Mar 27 02:42:55 2016 -0400
@@ -1,4 +1,4 @@
 <?xml version="1.0"?>
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 </repositories>