comparison clustalomega/clustal-omega-0.2.0/src/clustal-omega-config.h @ 0:ff1768533a07

Migrated tool version 0.2 from old tool shed archive to new tool shed repository
author clustalomega
date Tue, 07 Jun 2011 17:04:25 -0400
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-1:000000000000 0:ff1768533a07
1 #ifndef _SRC_CLUSTAL_OMEGA_CONFIG_H
2 #define _SRC_CLUSTAL_OMEGA_CONFIG_H 1
3
4 /* src/clustal-omega-config.h. Generated automatically at end of configure. */
5 /* src/config.h. Generated from config.h.in by configure. */
6 /* src/config.h.in. Generated from configure.ac by autoheader. */
7
8 /* Define if building universal (internal helper macro) */
9 /* #undef AC_APPLE_UNIVERSAL_BUILD */
10
11 /* Let all files know they are being used inside Clustal Omega */
12 #ifndef CLUSTAL_OMEGA_CLUSTALO
13 #define CLUSTAL_OMEGA_CLUSTALO 1
14 #endif
15
16 /* This is a CYGWIN system */
17 /* #undef CYGWIN */
18
19 /* This is a Darwin system */
20 /* #undef DARWIN */
21
22 /* Define to 1 if you have the <argtable2.h> header file. */
23 #ifndef CLUSTAL_OMEGA_HAVE_ARGTABLE2_H
24 #define CLUSTAL_OMEGA_HAVE_ARGTABLE2_H 1
25 #endif
26
27 /* Define to 1 if you have the <assert.h> header file. */
28 #ifndef CLUSTAL_OMEGA_HAVE_ASSERT_H
29 #define CLUSTAL_OMEGA_HAVE_ASSERT_H 1
30 #endif
31
32 /* Define to 1 if you have the <ctype.h> header file. */
33 #ifndef CLUSTAL_OMEGA_HAVE_CTYPE_H
34 #define CLUSTAL_OMEGA_HAVE_CTYPE_H 1
35 #endif
36
37 /* Define to 1 if you have the <dlfcn.h> header file. */
38 #ifndef CLUSTAL_OMEGA_HAVE_DLFCN_H
39 #define CLUSTAL_OMEGA_HAVE_DLFCN_H 1
40 #endif
41
42 /* Define to 1 if you have the <float.h> header file. */
43 #ifndef CLUSTAL_OMEGA_HAVE_FLOAT_H
44 #define CLUSTAL_OMEGA_HAVE_FLOAT_H 1
45 #endif
46
47 /* Define to 1 if you have the `fseek64' function. */
48 /* #undef HAVE_FSEEK64 */
49
50 /* Define to 1 if you have the `fseeko' function. */
51 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO
52 #define CLUSTAL_OMEGA_HAVE_FSEEKO 1
53 #endif
54
55 /* Define to 1 if you have the `fseeko64' function. */
56 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO64
57 #define CLUSTAL_OMEGA_HAVE_FSEEKO64 1
58 #endif
59
60 /* Define to 1 if you have the `ftell64' function. */
61 /* #undef HAVE_FTELL64 */
62
63 /* Define to 1 if you have the `ftello' function. */
64 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO
65 #define CLUSTAL_OMEGA_HAVE_FTELLO 1
66 #endif
67
68 /* Define to 1 if you have the `ftello64' function. */
69 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO64
70 #define CLUSTAL_OMEGA_HAVE_FTELLO64 1
71 #endif
72
73 /* Define to 1 if you have the <inttypes.h> header file. */
74 #ifndef CLUSTAL_OMEGA_HAVE_INTTYPES_H
75 #define CLUSTAL_OMEGA_HAVE_INTTYPES_H 1
76 #endif
77
78 /* Define to 1 if you have the `argtable2' library (-largtable2). */
79 #ifndef CLUSTAL_OMEGA_HAVE_LIBARGTABLE2
80 #define CLUSTAL_OMEGA_HAVE_LIBARGTABLE2 1
81 #endif
82
83 /* Define to 1 if you have the `m' library (-lm). */
84 #ifndef CLUSTAL_OMEGA_HAVE_LIBM
85 #define CLUSTAL_OMEGA_HAVE_LIBM 1
86 #endif
87
88 /* Define to 1 if you have the <limits.h> header file. */
89 #ifndef CLUSTAL_OMEGA_HAVE_LIMITS_H
90 #define CLUSTAL_OMEGA_HAVE_LIMITS_H 1
91 #endif
92
93 /* Has log2() */
94 #ifndef CLUSTAL_OMEGA_HAVE_LOG2
95 #define CLUSTAL_OMEGA_HAVE_LOG2 1
96 #endif
97
98 /* Define to 1 if you have the <math.h> header file. */
99 #ifndef CLUSTAL_OMEGA_HAVE_MATH_H
100 #define CLUSTAL_OMEGA_HAVE_MATH_H 1
101 #endif
102
103 /* Define to 1 if you have the <memory.h> header file. */
104 #ifndef CLUSTAL_OMEGA_HAVE_MEMORY_H
105 #define CLUSTAL_OMEGA_HAVE_MEMORY_H 1
106 #endif
107
108 /* Define to 1 if you have the `ntohl' function. */
109 #ifndef CLUSTAL_OMEGA_HAVE_NTOHL
110 #define CLUSTAL_OMEGA_HAVE_NTOHL 1
111 #endif
112
113 /* Define to 1 if you have the `ntohs' function. */
114 #ifndef CLUSTAL_OMEGA_HAVE_NTOHS
115 #define CLUSTAL_OMEGA_HAVE_NTOHS 1
116 #endif
117
118 /* Define to 1 if you have the `ntonl' function. */
119 /* #undef HAVE_NTONL */
120
121 /* Define to 1 if you have the `ntons' function. */
122 /* #undef HAVE_NTONS */
123
124 /* Defined if OpenMP should and can be used */
125 #ifndef CLUSTAL_OMEGA_HAVE_OPENMP
126 #define CLUSTAL_OMEGA_HAVE_OPENMP 1
127 #endif
128
129 /* Define to 1 if you have the <stdarg.h> header file. */
130 #ifndef CLUSTAL_OMEGA_HAVE_STDARG_H
131 #define CLUSTAL_OMEGA_HAVE_STDARG_H 1
132 #endif
133
134 /* Define to 1 if you have the <stdint.h> header file. */
135 #ifndef CLUSTAL_OMEGA_HAVE_STDINT_H
136 #define CLUSTAL_OMEGA_HAVE_STDINT_H 1
137 #endif
138
139 /* Define to 1 if you have the <stdio.h> header file. */
140 #ifndef CLUSTAL_OMEGA_HAVE_STDIO_H
141 #define CLUSTAL_OMEGA_HAVE_STDIO_H 1
142 #endif
143
144 /* Define to 1 if you have the <stdlib.h> header file. */
145 #ifndef CLUSTAL_OMEGA_HAVE_STDLIB_H
146 #define CLUSTAL_OMEGA_HAVE_STDLIB_H 1
147 #endif
148
149 /* Define to 1 if you have the <strings.h> header file. */
150 #ifndef CLUSTAL_OMEGA_HAVE_STRINGS_H
151 #define CLUSTAL_OMEGA_HAVE_STRINGS_H 1
152 #endif
153
154 /* Define to 1 if you have the <string.h> header file. */
155 #ifndef CLUSTAL_OMEGA_HAVE_STRING_H
156 #define CLUSTAL_OMEGA_HAVE_STRING_H 1
157 #endif
158
159 /* Define to 1 if you have the `stroul' function. */
160 /* #undef HAVE_STROUL */
161
162 /* Define to 1 if you have the `strtoull' function. */
163 #ifndef CLUSTAL_OMEGA_HAVE_STRTOULL
164 #define CLUSTAL_OMEGA_HAVE_STRTOULL 1
165 #endif
166
167 /* Define to 1 if you have the <sys/stat.h> header file. */
168 #ifndef CLUSTAL_OMEGA_HAVE_SYS_STAT_H
169 #define CLUSTAL_OMEGA_HAVE_SYS_STAT_H 1
170 #endif
171
172 /* Define to 1 if you have the <sys/types.h> header file. */
173 #ifndef CLUSTAL_OMEGA_HAVE_SYS_TYPES_H
174 #define CLUSTAL_OMEGA_HAVE_SYS_TYPES_H 1
175 #endif
176
177 /* Define to 1 if you have the <time.h> header file. */
178 #ifndef CLUSTAL_OMEGA_HAVE_TIME_H
179 #define CLUSTAL_OMEGA_HAVE_TIME_H 1
180 #endif
181
182 /* Define to 1 if you have the <unistd.h> header file. */
183 #ifndef CLUSTAL_OMEGA_HAVE_UNISTD_H
184 #define CLUSTAL_OMEGA_HAVE_UNISTD_H 1
185 #endif
186
187 /* This is a LINUX system */
188 #ifndef CLUSTAL_OMEGA_LINUX
189 #define CLUSTAL_OMEGA_LINUX 1
190 #endif
191
192 /* Define to the sub-directory in which libtool stores uninstalled libraries.
193 */
194 #ifndef CLUSTAL_OMEGA_LT_OBJDIR
195 #define CLUSTAL_OMEGA_LT_OBJDIR ".libs/"
196 #endif
197
198 /* This is a MinGW system */
199 /* #undef MINGW */
200
201 /* No-debug Mode */
202 #ifndef CLUSTAL_OMEGA_NDEBUG
203 #define CLUSTAL_OMEGA_NDEBUG /**/
204 #endif
205
206 /* Some strange OS */
207 /* #undef OTHEROS */
208
209 /* Name of package */
210 #ifndef CLUSTAL_OMEGA_PACKAGE
211 #define CLUSTAL_OMEGA_PACKAGE "clustal-omega"
212 #endif
213
214 /* Define to the address where bug reports for this package should be sent. */
215 #ifndef CLUSTAL_OMEGA_PACKAGE_BUGREPORT
216 #define CLUSTAL_OMEGA_PACKAGE_BUGREPORT "clustalw@ucd.ie"
217 #endif
218
219 /* The package code name */
220 #ifndef CLUSTAL_OMEGA_PACKAGE_CODENAME
221 #define CLUSTAL_OMEGA_PACKAGE_CODENAME "IbiMeVidebunt"
222 #endif
223
224 /* Define to the full name of this package. */
225 #ifndef CLUSTAL_OMEGA_PACKAGE_NAME
226 #define CLUSTAL_OMEGA_PACKAGE_NAME "Clustal Omega"
227 #endif
228
229 /* Define to the full name and version of this package. */
230 #ifndef CLUSTAL_OMEGA_PACKAGE_STRING
231 #define CLUSTAL_OMEGA_PACKAGE_STRING "Clustal Omega 0.2.0"
232 #endif
233
234 /* Define to the one symbol short name of this package. */
235 #ifndef CLUSTAL_OMEGA_PACKAGE_TARNAME
236 #define CLUSTAL_OMEGA_PACKAGE_TARNAME "clustal-omega"
237 #endif
238
239 /* Define to the home page for this package. */
240 #ifndef CLUSTAL_OMEGA_PACKAGE_URL
241 #define CLUSTAL_OMEGA_PACKAGE_URL ""
242 #endif
243
244 /* Define to the version of this package. */
245 #ifndef CLUSTAL_OMEGA_PACKAGE_VERSION
246 #define CLUSTAL_OMEGA_PACKAGE_VERSION "0.2.0"
247 #endif
248
249 /* The size of `fpos_t', as computed by sizeof. */
250 #ifndef CLUSTAL_OMEGA_SIZEOF_FPOS_T
251 #define CLUSTAL_OMEGA_SIZEOF_FPOS_T 16
252 #endif
253
254 /* The size of `unsigned int', as computed by sizeof. */
255 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT
256 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT 4
257 #endif
258
259 /* The size of `unsigned long', as computed by sizeof. */
260 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG
261 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG 8
262 #endif
263
264 /* The size of `unsigned long long', as computed by sizeof. */
265 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG
266 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG 8
267 #endif
268
269 /* The size of `unsigned short', as computed by sizeof. */
270 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT
271 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT 2
272 #endif
273
274 /* This is a Solaris system */
275 /* #undef SOLARIS */
276
277 /* This is a BSD system */
278 /* #undef SOMEBSD */
279
280 /* Define to 1 if you have the ANSI C header files. */
281 #ifndef CLUSTAL_OMEGA_STDC_HEADERS
282 #define CLUSTAL_OMEGA_STDC_HEADERS 1
283 #endif
284
285 /* Enable extensions on AIX 3, Interix. */
286 #ifndef _ALL_SOURCE
287 # define _ALL_SOURCE 1
288 #endif
289 /* Enable GNU extensions on systems that have them. */
290 #ifndef _GNU_SOURCE
291 # define _GNU_SOURCE 1
292 #endif
293 /* Enable threading extensions on Solaris. */
294 #ifndef _POSIX_PTHREAD_SEMANTICS
295 # define _POSIX_PTHREAD_SEMANTICS 1
296 #endif
297 /* Enable extensions on HP NonStop. */
298 #ifndef _TANDEM_SOURCE
299 # define _TANDEM_SOURCE 1
300 #endif
301 /* Enable general extensions on Solaris. */
302 #ifndef __EXTENSIONS__
303 # define __EXTENSIONS__ 1
304 #endif
305
306
307 /* Version number of package */
308 #ifndef CLUSTAL_OMEGA_VERSION
309 #define CLUSTAL_OMEGA_VERSION "0.2.0"
310 #endif
311
312 /* Define if using the dmalloc debugging malloc package */
313 /* #undef WITH_DMALLOC */
314
315 /* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
316 significant byte first (like Motorola and SPARC, unlike Intel). */
317 #if defined AC_APPLE_UNIVERSAL_BUILD
318 # if defined __BIG_ENDIAN__
319 # define WORDS_BIGENDIAN 1
320 # endif
321 #else
322 # ifndef WORDS_BIGENDIAN
323 /* # undef WORDS_BIGENDIAN */
324 # endif
325 #endif
326
327 /* Define to 1 if on MINIX. */
328 /* #undef _MINIX */
329
330 /* Define to 2 if the system does not provide POSIX.1 features except with
331 this defined. */
332 /* #undef _POSIX_1_SOURCE */
333
334 /* Define to 1 if you need to in order for `stat' and other things to work. */
335 /* #undef _POSIX_SOURCE */
336
337 /* Define to empty if `const' does not conform to ANSI C. */
338 /* #undef const */
339
340 /* Define to `__inline__' or `__inline' if that's what the C compiler
341 calls it, or to nothing if 'inline' is not supported under any name. */
342 #ifndef __cplusplus
343 /* #undef inline */
344 #endif
345
346 /* Define to `long int' if <sys/types.h> does not define. */
347 /* #undef off_t */
348
349 /* Define to `unsigned int' if <sys/types.h> does not define. */
350 /* #undef size_t */
351
352 /* once: _SRC_CLUSTAL_OMEGA_CONFIG_H */
353 #endif