annotate clustalomega/clustal-omega-0.2.0/src/clustal-omega-config.h @ 0:ff1768533a07

Migrated tool version 0.2 from old tool shed archive to new tool shed repository
author clustalomega
date Tue, 07 Jun 2011 17:04:25 -0400
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1 #ifndef _SRC_CLUSTAL_OMEGA_CONFIG_H
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2 #define _SRC_CLUSTAL_OMEGA_CONFIG_H 1
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3
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4 /* src/clustal-omega-config.h. Generated automatically at end of configure. */
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5 /* src/config.h. Generated from config.h.in by configure. */
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6 /* src/config.h.in. Generated from configure.ac by autoheader. */
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7
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8 /* Define if building universal (internal helper macro) */
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9 /* #undef AC_APPLE_UNIVERSAL_BUILD */
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10
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11 /* Let all files know they are being used inside Clustal Omega */
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12 #ifndef CLUSTAL_OMEGA_CLUSTALO
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13 #define CLUSTAL_OMEGA_CLUSTALO 1
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14 #endif
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15
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16 /* This is a CYGWIN system */
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17 /* #undef CYGWIN */
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18
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19 /* This is a Darwin system */
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20 /* #undef DARWIN */
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21
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22 /* Define to 1 if you have the <argtable2.h> header file. */
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23 #ifndef CLUSTAL_OMEGA_HAVE_ARGTABLE2_H
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24 #define CLUSTAL_OMEGA_HAVE_ARGTABLE2_H 1
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25 #endif
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26
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27 /* Define to 1 if you have the <assert.h> header file. */
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28 #ifndef CLUSTAL_OMEGA_HAVE_ASSERT_H
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29 #define CLUSTAL_OMEGA_HAVE_ASSERT_H 1
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30 #endif
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31
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32 /* Define to 1 if you have the <ctype.h> header file. */
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33 #ifndef CLUSTAL_OMEGA_HAVE_CTYPE_H
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34 #define CLUSTAL_OMEGA_HAVE_CTYPE_H 1
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35 #endif
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36
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37 /* Define to 1 if you have the <dlfcn.h> header file. */
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38 #ifndef CLUSTAL_OMEGA_HAVE_DLFCN_H
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39 #define CLUSTAL_OMEGA_HAVE_DLFCN_H 1
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40 #endif
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41
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42 /* Define to 1 if you have the <float.h> header file. */
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43 #ifndef CLUSTAL_OMEGA_HAVE_FLOAT_H
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44 #define CLUSTAL_OMEGA_HAVE_FLOAT_H 1
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45 #endif
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46
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47 /* Define to 1 if you have the `fseek64' function. */
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48 /* #undef HAVE_FSEEK64 */
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49
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50 /* Define to 1 if you have the `fseeko' function. */
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51 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO
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52 #define CLUSTAL_OMEGA_HAVE_FSEEKO 1
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53 #endif
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54
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55 /* Define to 1 if you have the `fseeko64' function. */
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56 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO64
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57 #define CLUSTAL_OMEGA_HAVE_FSEEKO64 1
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58 #endif
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59
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60 /* Define to 1 if you have the `ftell64' function. */
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61 /* #undef HAVE_FTELL64 */
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62
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63 /* Define to 1 if you have the `ftello' function. */
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64 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO
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65 #define CLUSTAL_OMEGA_HAVE_FTELLO 1
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66 #endif
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67
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68 /* Define to 1 if you have the `ftello64' function. */
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69 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO64
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70 #define CLUSTAL_OMEGA_HAVE_FTELLO64 1
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71 #endif
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72
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73 /* Define to 1 if you have the <inttypes.h> header file. */
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74 #ifndef CLUSTAL_OMEGA_HAVE_INTTYPES_H
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75 #define CLUSTAL_OMEGA_HAVE_INTTYPES_H 1
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76 #endif
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77
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78 /* Define to 1 if you have the `argtable2' library (-largtable2). */
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79 #ifndef CLUSTAL_OMEGA_HAVE_LIBARGTABLE2
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80 #define CLUSTAL_OMEGA_HAVE_LIBARGTABLE2 1
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81 #endif
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82
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83 /* Define to 1 if you have the `m' library (-lm). */
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84 #ifndef CLUSTAL_OMEGA_HAVE_LIBM
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85 #define CLUSTAL_OMEGA_HAVE_LIBM 1
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86 #endif
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87
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88 /* Define to 1 if you have the <limits.h> header file. */
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89 #ifndef CLUSTAL_OMEGA_HAVE_LIMITS_H
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90 #define CLUSTAL_OMEGA_HAVE_LIMITS_H 1
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91 #endif
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92
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93 /* Has log2() */
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94 #ifndef CLUSTAL_OMEGA_HAVE_LOG2
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95 #define CLUSTAL_OMEGA_HAVE_LOG2 1
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96 #endif
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97
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98 /* Define to 1 if you have the <math.h> header file. */
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99 #ifndef CLUSTAL_OMEGA_HAVE_MATH_H
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100 #define CLUSTAL_OMEGA_HAVE_MATH_H 1
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101 #endif
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102
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103 /* Define to 1 if you have the <memory.h> header file. */
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104 #ifndef CLUSTAL_OMEGA_HAVE_MEMORY_H
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105 #define CLUSTAL_OMEGA_HAVE_MEMORY_H 1
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106 #endif
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107
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108 /* Define to 1 if you have the `ntohl' function. */
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109 #ifndef CLUSTAL_OMEGA_HAVE_NTOHL
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110 #define CLUSTAL_OMEGA_HAVE_NTOHL 1
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111 #endif
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112
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113 /* Define to 1 if you have the `ntohs' function. */
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114 #ifndef CLUSTAL_OMEGA_HAVE_NTOHS
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115 #define CLUSTAL_OMEGA_HAVE_NTOHS 1
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116 #endif
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117
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118 /* Define to 1 if you have the `ntonl' function. */
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119 /* #undef HAVE_NTONL */
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120
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121 /* Define to 1 if you have the `ntons' function. */
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122 /* #undef HAVE_NTONS */
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123
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124 /* Defined if OpenMP should and can be used */
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125 #ifndef CLUSTAL_OMEGA_HAVE_OPENMP
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126 #define CLUSTAL_OMEGA_HAVE_OPENMP 1
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127 #endif
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128
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129 /* Define to 1 if you have the <stdarg.h> header file. */
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130 #ifndef CLUSTAL_OMEGA_HAVE_STDARG_H
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131 #define CLUSTAL_OMEGA_HAVE_STDARG_H 1
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132 #endif
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133
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134 /* Define to 1 if you have the <stdint.h> header file. */
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135 #ifndef CLUSTAL_OMEGA_HAVE_STDINT_H
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136 #define CLUSTAL_OMEGA_HAVE_STDINT_H 1
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137 #endif
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138
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139 /* Define to 1 if you have the <stdio.h> header file. */
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140 #ifndef CLUSTAL_OMEGA_HAVE_STDIO_H
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141 #define CLUSTAL_OMEGA_HAVE_STDIO_H 1
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142 #endif
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143
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144 /* Define to 1 if you have the <stdlib.h> header file. */
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145 #ifndef CLUSTAL_OMEGA_HAVE_STDLIB_H
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146 #define CLUSTAL_OMEGA_HAVE_STDLIB_H 1
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147 #endif
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148
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149 /* Define to 1 if you have the <strings.h> header file. */
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150 #ifndef CLUSTAL_OMEGA_HAVE_STRINGS_H
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151 #define CLUSTAL_OMEGA_HAVE_STRINGS_H 1
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152 #endif
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153
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154 /* Define to 1 if you have the <string.h> header file. */
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155 #ifndef CLUSTAL_OMEGA_HAVE_STRING_H
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156 #define CLUSTAL_OMEGA_HAVE_STRING_H 1
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157 #endif
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158
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159 /* Define to 1 if you have the `stroul' function. */
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160 /* #undef HAVE_STROUL */
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161
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162 /* Define to 1 if you have the `strtoull' function. */
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163 #ifndef CLUSTAL_OMEGA_HAVE_STRTOULL
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164 #define CLUSTAL_OMEGA_HAVE_STRTOULL 1
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165 #endif
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166
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167 /* Define to 1 if you have the <sys/stat.h> header file. */
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168 #ifndef CLUSTAL_OMEGA_HAVE_SYS_STAT_H
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169 #define CLUSTAL_OMEGA_HAVE_SYS_STAT_H 1
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170 #endif
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171
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172 /* Define to 1 if you have the <sys/types.h> header file. */
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173 #ifndef CLUSTAL_OMEGA_HAVE_SYS_TYPES_H
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174 #define CLUSTAL_OMEGA_HAVE_SYS_TYPES_H 1
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175 #endif
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176
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177 /* Define to 1 if you have the <time.h> header file. */
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178 #ifndef CLUSTAL_OMEGA_HAVE_TIME_H
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179 #define CLUSTAL_OMEGA_HAVE_TIME_H 1
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180 #endif
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181
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182 /* Define to 1 if you have the <unistd.h> header file. */
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183 #ifndef CLUSTAL_OMEGA_HAVE_UNISTD_H
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184 #define CLUSTAL_OMEGA_HAVE_UNISTD_H 1
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185 #endif
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186
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187 /* This is a LINUX system */
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188 #ifndef CLUSTAL_OMEGA_LINUX
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189 #define CLUSTAL_OMEGA_LINUX 1
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190 #endif
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191
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192 /* Define to the sub-directory in which libtool stores uninstalled libraries.
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193 */
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194 #ifndef CLUSTAL_OMEGA_LT_OBJDIR
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195 #define CLUSTAL_OMEGA_LT_OBJDIR ".libs/"
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196 #endif
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197
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198 /* This is a MinGW system */
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199 /* #undef MINGW */
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200
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201 /* No-debug Mode */
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202 #ifndef CLUSTAL_OMEGA_NDEBUG
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203 #define CLUSTAL_OMEGA_NDEBUG /**/
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204 #endif
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205
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206 /* Some strange OS */
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207 /* #undef OTHEROS */
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208
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209 /* Name of package */
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210 #ifndef CLUSTAL_OMEGA_PACKAGE
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211 #define CLUSTAL_OMEGA_PACKAGE "clustal-omega"
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212 #endif
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213
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214 /* Define to the address where bug reports for this package should be sent. */
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215 #ifndef CLUSTAL_OMEGA_PACKAGE_BUGREPORT
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216 #define CLUSTAL_OMEGA_PACKAGE_BUGREPORT "clustalw@ucd.ie"
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217 #endif
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218
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219 /* The package code name */
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220 #ifndef CLUSTAL_OMEGA_PACKAGE_CODENAME
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221 #define CLUSTAL_OMEGA_PACKAGE_CODENAME "IbiMeVidebunt"
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222 #endif
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223
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224 /* Define to the full name of this package. */
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225 #ifndef CLUSTAL_OMEGA_PACKAGE_NAME
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226 #define CLUSTAL_OMEGA_PACKAGE_NAME "Clustal Omega"
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227 #endif
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228
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229 /* Define to the full name and version of this package. */
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230 #ifndef CLUSTAL_OMEGA_PACKAGE_STRING
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231 #define CLUSTAL_OMEGA_PACKAGE_STRING "Clustal Omega 0.2.0"
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232 #endif
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233
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234 /* Define to the one symbol short name of this package. */
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235 #ifndef CLUSTAL_OMEGA_PACKAGE_TARNAME
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236 #define CLUSTAL_OMEGA_PACKAGE_TARNAME "clustal-omega"
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237 #endif
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238
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239 /* Define to the home page for this package. */
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240 #ifndef CLUSTAL_OMEGA_PACKAGE_URL
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241 #define CLUSTAL_OMEGA_PACKAGE_URL ""
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242 #endif
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243
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244 /* Define to the version of this package. */
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245 #ifndef CLUSTAL_OMEGA_PACKAGE_VERSION
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246 #define CLUSTAL_OMEGA_PACKAGE_VERSION "0.2.0"
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247 #endif
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248
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249 /* The size of `fpos_t', as computed by sizeof. */
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250 #ifndef CLUSTAL_OMEGA_SIZEOF_FPOS_T
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251 #define CLUSTAL_OMEGA_SIZEOF_FPOS_T 16
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252 #endif
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253
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254 /* The size of `unsigned int', as computed by sizeof. */
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255 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT
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256 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT 4
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257 #endif
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258
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259 /* The size of `unsigned long', as computed by sizeof. */
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260 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG
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261 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG 8
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262 #endif
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263
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264 /* The size of `unsigned long long', as computed by sizeof. */
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265 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG
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266 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG 8
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267 #endif
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268
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269 /* The size of `unsigned short', as computed by sizeof. */
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270 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT
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271 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT 2
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272 #endif
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273
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274 /* This is a Solaris system */
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275 /* #undef SOLARIS */
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276
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277 /* This is a BSD system */
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278 /* #undef SOMEBSD */
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279
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280 /* Define to 1 if you have the ANSI C header files. */
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281 #ifndef CLUSTAL_OMEGA_STDC_HEADERS
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282 #define CLUSTAL_OMEGA_STDC_HEADERS 1
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283 #endif
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284
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285 /* Enable extensions on AIX 3, Interix. */
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286 #ifndef _ALL_SOURCE
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287 # define _ALL_SOURCE 1
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288 #endif
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289 /* Enable GNU extensions on systems that have them. */
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290 #ifndef _GNU_SOURCE
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291 # define _GNU_SOURCE 1
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292 #endif
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293 /* Enable threading extensions on Solaris. */
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294 #ifndef _POSIX_PTHREAD_SEMANTICS
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295 # define _POSIX_PTHREAD_SEMANTICS 1
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296 #endif
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297 /* Enable extensions on HP NonStop. */
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298 #ifndef _TANDEM_SOURCE
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299 # define _TANDEM_SOURCE 1
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300 #endif
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301 /* Enable general extensions on Solaris. */
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302 #ifndef __EXTENSIONS__
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303 # define __EXTENSIONS__ 1
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304 #endif
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305
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306
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307 /* Version number of package */
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308 #ifndef CLUSTAL_OMEGA_VERSION
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309 #define CLUSTAL_OMEGA_VERSION "0.2.0"
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310 #endif
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311
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312 /* Define if using the dmalloc debugging malloc package */
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313 /* #undef WITH_DMALLOC */
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314
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315 /* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
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316 significant byte first (like Motorola and SPARC, unlike Intel). */
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317 #if defined AC_APPLE_UNIVERSAL_BUILD
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318 # if defined __BIG_ENDIAN__
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319 # define WORDS_BIGENDIAN 1
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320 # endif
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321 #else
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322 # ifndef WORDS_BIGENDIAN
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323 /* # undef WORDS_BIGENDIAN */
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324 # endif
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325 #endif
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326
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327 /* Define to 1 if on MINIX. */
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328 /* #undef _MINIX */
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329
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330 /* Define to 2 if the system does not provide POSIX.1 features except with
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331 this defined. */
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332 /* #undef _POSIX_1_SOURCE */
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333
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334 /* Define to 1 if you need to in order for `stat' and other things to work. */
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335 /* #undef _POSIX_SOURCE */
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336
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337 /* Define to empty if `const' does not conform to ANSI C. */
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338 /* #undef const */
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339
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340 /* Define to `__inline__' or `__inline' if that's what the C compiler
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341 calls it, or to nothing if 'inline' is not supported under any name. */
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342 #ifndef __cplusplus
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343 /* #undef inline */
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344 #endif
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345
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346 /* Define to `long int' if <sys/types.h> does not define. */
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347 /* #undef off_t */
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348
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349 /* Define to `unsigned int' if <sys/types.h> does not define. */
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350 /* #undef size_t */
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351
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352 /* once: _SRC_CLUSTAL_OMEGA_CONFIG_H */
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353 #endif