changeset 2:1478d48df8c7

add R and gplots dependencies
author cmonjeau
date Thu, 10 Sep 2015 09:59:53 +0000
parents 0a09dd575d91
children d085f995d556
files commet.xml tool_dependencies.xml
diffstat 2 files changed, 10 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/commet.xml	Mon Jul 06 15:47:04 2015 +0000
+++ b/commet.xml	Thu Sep 10 09:59:53 2015 +0000
@@ -2,6 +2,8 @@
   <description>COmpare Multiple METagenomes</description>
   <requirements>
     <requirement type="package" version="24.7.14">commet</requirement>
+    <requirement type="package" version="2.15.0">R</requirement>
+    <requirement type="package" version="0.9.3">ggplot2</requirement>
   </requirements>
 <command interpreter="python">
 commet.py
--- a/tool_dependencies.xml	Mon Jul 06 15:47:04 2015 +0000
+++ b/tool_dependencies.xml	Thu Sep 10 09:59:53 2015 +0000
@@ -2,5 +2,12 @@
 <tool_dependency>
   <package name="commet" version="24.7.14">
       <repository changeset_revision="741836b9e2c5" name="package_commet_24_07_14" owner="cmonjeau" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
-    </package>
+  </package>
+  <package name="R" version="2.15.0">
+       <repository changeset_revision="07de191649b4" name="package_r_ggplot2_0_9_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+  </package>
+  <package name="ggplot2" version="0.9.3">
+       <repository changeset_revision="07de191649b4" name="package_r_ggplot2_0_9_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+  </package>
+
 </tool_dependency>