annotate test-data/cvt_network.sif @ 15:cb4dce1042ef draft

Changed VGX to JGF
author computationaltranscriptomics
date Thu, 02 Jun 2016 09:32:40 -0400
parents f5e05d6382c8
children
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computationaltranscriptomics
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1 root pp cellular_organisms
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2 cellular_organisms pp Bacteria
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3 Bacteria pp Actinobacteria_<phylum>
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4 Bacteria pp Aquificae_<phylum>
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5 Bacteria pp Armatimonadetes
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6 Bacteria pp Bacteroidetes/Chlorobi_group
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7 Bacteria pp Caldiserica
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8 Bacteria pp Chlamydiae/Verrucomicrobia_group
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9 Bacteria pp Chloroflexi_<phylum>
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10 Bacteria pp Chrysiogenetes_<phylum>
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11 Bacteria pp Cyanobacteria
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12 Cyanobacteria pp environmental_samples_<Cyanobacteria>
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13 Cyanobacteria pp Gloeobacteria
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14 Cyanobacteria pp Nostocales
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15 Cyanobacteria pp Oscillatoriophycideae
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16 Cyanobacteria pp Pleurocapsales
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17 Cyanobacteria pp Prochlorales
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18 Prochlorales pp environmental_samples_<Prochlorophytes>
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19 Prochlorales pp Prochloraceae
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20 Prochlorales pp Prochlorococcaceae
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21 Prochlorococcaceae pp Prochlorococcus
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22 Prochlorococcus pp environmental_samples_<Prochlorococcus>
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23 Prochlorococcus pp Prochlorococcus_marinus
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24 Prochlorococcus_marinus pp environmental_samples_<Prochlorococcus_marinus>
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25 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._AS9601
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26 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._CCMP1377
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27 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._GP2
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28 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9107
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29 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9116
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30 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9201
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31 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9202
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32 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9211
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33 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9215
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34 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9301
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35 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9302
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36 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9303
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37 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9312
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38 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9313
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computationaltranscriptomics
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39 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9515
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computationaltranscriptomics
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40 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1A
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computationaltranscriptomics
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41 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1MIT
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computationaltranscriptomics
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42 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL2A
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computationaltranscriptomics
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43 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1
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computationaltranscriptomics
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44 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1A
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45 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1B
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46 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC2
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computationaltranscriptomics
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47 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS2001
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computationaltranscriptomics
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48 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS810
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49 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._SB
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computationaltranscriptomics
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50 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803
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computationaltranscriptomics
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51 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803-2
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computationaltranscriptomics
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52 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1
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53 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1B
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computationaltranscriptomics
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54 Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._marinus
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computationaltranscriptomics
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55 Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._pastoris
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computationaltranscriptomics
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56 Prochlorococcus pp Prochlorococcus_sp.
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computationaltranscriptomics
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57 Prochlorales pp Prochlorotrichaceae
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computationaltranscriptomics
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58 Cyanobacteria pp Stigonematales
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computationaltranscriptomics
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59 Cyanobacteria pp unclassified_Cyanobacteria
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computationaltranscriptomics
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60 Bacteria pp Deferribacteres_<phylum>
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61 Bacteria pp Deinococcus-Thermus
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62 Bacteria pp Dictyoglomi
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computationaltranscriptomics
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63 Bacteria pp Elusimicrobia
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computationaltranscriptomics
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64 Bacteria pp environmental_samples_<Bacteria>
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computationaltranscriptomics
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65 Bacteria pp Fibrobacteres/Acidobacteria_group
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computationaltranscriptomics
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66 Bacteria pp Firmicutes
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67 Bacteria pp Fusobacteria
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computationaltranscriptomics
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68 Bacteria pp Gemmatimonadetes
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computationaltranscriptomics
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69 Bacteria pp Nitrospinae
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computationaltranscriptomics
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70 Bacteria pp Nitrospirae
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computationaltranscriptomics
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71 Bacteria pp Planctomycetes
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computationaltranscriptomics
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72 Bacteria pp Proteobacteria
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computationaltranscriptomics
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73 Bacteria pp Spirochaetes
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computationaltranscriptomics
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74 Bacteria pp Synergistetes
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computationaltranscriptomics
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75 Bacteria pp Tenericutes
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computationaltranscriptomics
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76 Bacteria pp Thermodesulfobacteria_<phylum>
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computationaltranscriptomics
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77 Bacteria pp Thermotogae_<phylum>
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computationaltranscriptomics
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78 Bacteria pp unclassified_Bacteria
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computationaltranscriptomics
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79 cellular_organisms pp Archaea
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80 cellular_organisms pp Eukaryota
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computationaltranscriptomics
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81 root pp Viruses
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computationaltranscriptomics
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82 Viruses pp dsDNA_viruses,_no_RNA_stage
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computationaltranscriptomics
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83 Viruses pp dsRNA_viruses
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computationaltranscriptomics
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84 Viruses pp environmental_samples_<viruses>
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computationaltranscriptomics
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85 Viruses pp Retro-transcribing_viruses
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computationaltranscriptomics
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86 Viruses pp ssDNA_viruses
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computationaltranscriptomics
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87 Viruses pp ssRNA_viruses
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computationaltranscriptomics
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88 Viruses pp unassigned_viruses
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computationaltranscriptomics
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89 Viruses pp unclassified_phages
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90 Viruses pp unclassified_viruses
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91 root pp unclassified_sequences
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92 root pp other_sequences
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93 root pp Not_assigned
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computationaltranscriptomics
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94 Viruses pp not_assigned_Viruses
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computationaltranscriptomics
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95 Prochlorococcus_marinus pp not_assigned_Prochlorococcus_marinus
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computationaltranscriptomics
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96 Prochlorococcus pp not_assigned_Prochlorococcus
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computationaltranscriptomics
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97 Prochlorales pp not_assigned_Prochlorales
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computationaltranscriptomics
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98 Cyanobacteria pp not_assigned_Cyanobacteria
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computationaltranscriptomics
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99 Bacteria pp not_assigned_Bacteria
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computationaltranscriptomics
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100 cellular_organisms pp not_assigned_cellular_organisms
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computationaltranscriptomics
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101 root pp not_assigned_root