annotate test-data/cvt_network.sif @ 2:f5e05d6382c8 draft

Uploaded
author computationaltranscriptomics
date Tue, 23 Feb 2016 09:17:36 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
1 root pp cellular_organisms
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
2 cellular_organisms pp Bacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
3 Bacteria pp Actinobacteria_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
4 Bacteria pp Aquificae_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
5 Bacteria pp Armatimonadetes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
6 Bacteria pp Bacteroidetes/Chlorobi_group
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
7 Bacteria pp Caldiserica
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
8 Bacteria pp Chlamydiae/Verrucomicrobia_group
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
9 Bacteria pp Chloroflexi_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
10 Bacteria pp Chrysiogenetes_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
11 Bacteria pp Cyanobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
12 Cyanobacteria pp environmental_samples_<Cyanobacteria>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
13 Cyanobacteria pp Gloeobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
14 Cyanobacteria pp Nostocales
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
15 Cyanobacteria pp Oscillatoriophycideae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
16 Cyanobacteria pp Pleurocapsales
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
17 Cyanobacteria pp Prochlorales
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
18 Prochlorales pp environmental_samples_<Prochlorophytes>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
19 Prochlorales pp Prochloraceae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
20 Prochlorales pp Prochlorococcaceae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
21 Prochlorococcaceae pp Prochlorococcus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
22 Prochlorococcus pp environmental_samples_<Prochlorococcus>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
23 Prochlorococcus pp Prochlorococcus_marinus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
24 Prochlorococcus_marinus pp environmental_samples_<Prochlorococcus_marinus>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
25 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._AS9601
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
26 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._CCMP1377
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
27 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._GP2
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
28 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9107
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
29 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9116
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
30 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9201
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
31 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9202
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
32 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9211
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
33 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9215
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
34 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9301
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
35 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9302
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
36 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9303
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
37 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9312
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
38 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9313
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
39 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9515
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
40 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1A
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
41 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1MIT
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
42 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL2A
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
43 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
44 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1A
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
45 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1B
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
46 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC2
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
47 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS2001
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
48 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS810
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
49 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._SB
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
50 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
51 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803-2
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
52 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
53 Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1B
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
54 Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._marinus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
55 Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._pastoris
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
56 Prochlorococcus pp Prochlorococcus_sp.
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
57 Prochlorales pp Prochlorotrichaceae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
58 Cyanobacteria pp Stigonematales
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
59 Cyanobacteria pp unclassified_Cyanobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
60 Bacteria pp Deferribacteres_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
61 Bacteria pp Deinococcus-Thermus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
62 Bacteria pp Dictyoglomi
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
63 Bacteria pp Elusimicrobia
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
64 Bacteria pp environmental_samples_<Bacteria>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
65 Bacteria pp Fibrobacteres/Acidobacteria_group
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
66 Bacteria pp Firmicutes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
67 Bacteria pp Fusobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
68 Bacteria pp Gemmatimonadetes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
69 Bacteria pp Nitrospinae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
70 Bacteria pp Nitrospirae
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
71 Bacteria pp Planctomycetes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
72 Bacteria pp Proteobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
73 Bacteria pp Spirochaetes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
74 Bacteria pp Synergistetes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
75 Bacteria pp Tenericutes
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
76 Bacteria pp Thermodesulfobacteria_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
77 Bacteria pp Thermotogae_<phylum>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
78 Bacteria pp unclassified_Bacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
79 cellular_organisms pp Archaea
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
80 cellular_organisms pp Eukaryota
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
81 root pp Viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
82 Viruses pp dsDNA_viruses,_no_RNA_stage
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
83 Viruses pp dsRNA_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
84 Viruses pp environmental_samples_<viruses>
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
85 Viruses pp Retro-transcribing_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
86 Viruses pp ssDNA_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
87 Viruses pp ssRNA_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
88 Viruses pp unassigned_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
89 Viruses pp unclassified_phages
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
90 Viruses pp unclassified_viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
91 root pp unclassified_sequences
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
92 root pp other_sequences
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
93 root pp Not_assigned
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
94 Viruses pp not_assigned_Viruses
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
95 Prochlorococcus_marinus pp not_assigned_Prochlorococcus_marinus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
96 Prochlorococcus pp not_assigned_Prochlorococcus
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
97 Prochlorales pp not_assigned_Prochlorales
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
98 Cyanobacteria pp not_assigned_Cyanobacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
99 Bacteria pp not_assigned_Bacteria
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
100 cellular_organisms pp not_assigned_cellular_organisms
f5e05d6382c8 Uploaded
computationaltranscriptomics
parents:
diff changeset
101 root pp not_assigned_root