annotate cpt_intersect_adj/test-data/T7_IntersectBIn.gff3 @ 0:4c72b6accdee draft

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author cpt
date Fri, 13 May 2022 05:05:59 +0000
parents
children
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cpt
parents:
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1 ##gff-version 3
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cpt
parents:
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2 ##sequence-region NC_001604 1 39937
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cpt
parents:
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3 NC_001604 cpt.fixModel gene 627 824 . - . ID=ORF.0.3363_0.587331907045
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cpt
parents:
diff changeset
4 NC_001604 cpt.fixModel mRNA 627 824 . - . ID=ORF.0.3363_0.587331907045.mRNA;Parent=ORF.0.3363_0.587331907045
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cpt
parents:
diff changeset
5 NC_001604 getOrfsOrCds CDS 627 824 . - 0 ID=ORF.0.3363_0.587331907045.CDS;Parent=ORF.0.3363_0.587331907045.mRNA
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cpt
parents:
diff changeset
6 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 837 839 . - . ID=ORF.0.3363_0.587331907045.rbs-0;Parent=ORF.0.3363_0.587331907045
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cpt
parents:
diff changeset
7 NC_001604 CPT_LipoRy Lipobox 693 704 . - . ID=ORF.0.3363_0.587331907045.lipobox;Parent=ORF.0.3363_0.587331907045;sequence=FTLC
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cpt
parents:
diff changeset
8 NC_001604 cpt.fixModel gene 627 734 . - . ID=ORF.0.3367_0.864588620692
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cpt
parents:
diff changeset
9 NC_001604 cpt.fixModel mRNA 627 734 . - . ID=ORF.0.3367_0.864588620692.mRNA;Parent=ORF.0.3367_0.864588620692
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cpt
parents:
diff changeset
10 NC_001604 getOrfsOrCds CDS 627 734 . - 0 ID=ORF.0.3367_0.864588620692.CDS;Parent=ORF.0.3367_0.864588620692.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
11 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 745 747 . - . ID=ORF.0.3367_0.864588620692.rbs-0;Parent=ORF.0.3367_0.864588620692
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cpt
parents:
diff changeset
12 NC_001604 CPT_LipoRy Lipobox 693 704 . - . ID=ORF.0.3367_0.864588620692.lipobox;Parent=ORF.0.3367_0.864588620692;sequence=FTLC
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cpt
parents:
diff changeset
13 NC_001604 cpt.fixModel gene 1182 1298 . - . ID=ORF.0.3359_0.0923195020918
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cpt
parents:
diff changeset
14 NC_001604 cpt.fixModel mRNA 1182 1298 . - . ID=ORF.0.3359_0.0923195020918.mRNA;Parent=ORF.0.3359_0.0923195020918
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cpt
parents:
diff changeset
15 NC_001604 getOrfsOrCds CDS 1182 1298 . - 0 ID=ORF.0.3359_0.0923195020918.CDS;Parent=ORF.0.3359_0.0923195020918.mRNA
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cpt
parents:
diff changeset
16 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1308 1310 . - . ID=ORF.0.3359_0.0923195020918.rbs-0;Parent=ORF.0.3359_0.0923195020918
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cpt
parents:
diff changeset
17 NC_001604 CPT_LipoRy Lipobox 1188 1199 . - . ID=ORF.0.3359_0.0923195020918.lipobox;Parent=ORF.0.3359_0.0923195020918;sequence=IVNC
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cpt
parents:
diff changeset
18 NC_001604 cpt.fixModel gene 1496 1639 . + . ID=ORF.0.566_0.38534199341
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cpt
parents:
diff changeset
19 NC_001604 cpt.fixModel mRNA 1496 1639 . + . ID=ORF.0.566_0.38534199341.mRNA;Parent=ORF.0.566_0.38534199341
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cpt
parents:
diff changeset
20 NC_001604 getOrfsOrCds CDS 1496 1639 . + 0 ID=ORF.0.566_0.38534199341.CDS;Parent=ORF.0.566_0.38534199341.mRNA
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cpt
parents:
diff changeset
21 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1487 1490 . + . ID=ORF.0.566_0.38534199341.rbs-0;Parent=ORF.0.566_0.38534199341
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cpt
parents:
diff changeset
22 NC_001604 CPT_LipoRy Lipobox 1589 1600 . + . ID=ORF.0.566_0.38534199341.lipobox;Parent=ORF.0.566_0.38534199341;sequence=FTAC
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cpt
parents:
diff changeset
23 NC_001604 cpt.fixModel gene 1502 1639 . + . ID=ORF.0.567_0.804461971525
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cpt
parents:
diff changeset
24 NC_001604 cpt.fixModel mRNA 1502 1639 . + . ID=ORF.0.567_0.804461971525.mRNA;Parent=ORF.0.567_0.804461971525
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cpt
parents:
diff changeset
25 NC_001604 getOrfsOrCds CDS 1502 1639 . + 0 ID=ORF.0.567_0.804461971525.CDS;Parent=ORF.0.567_0.804461971525.mRNA
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cpt
parents:
diff changeset
26 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1487 1490 . + . ID=ORF.0.567_0.804461971525.rbs-0;Parent=ORF.0.567_0.804461971525
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cpt
parents:
diff changeset
27 NC_001604 CPT_LipoRy Lipobox 1589 1600 . + . ID=ORF.0.567_0.804461971525.lipobox;Parent=ORF.0.567_0.804461971525;sequence=FTAC
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cpt
parents:
diff changeset
28 NC_001604 cpt.fixModel gene 1779 2021 . - . ID=ORF.0.3347_0.667378729511
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cpt
parents:
diff changeset
29 NC_001604 cpt.fixModel mRNA 1779 2021 . - . ID=ORF.0.3347_0.667378729511.mRNA;Parent=ORF.0.3347_0.667378729511
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cpt
parents:
diff changeset
30 NC_001604 getOrfsOrCds CDS 1779 2021 . - 0 ID=ORF.0.3347_0.667378729511.CDS;Parent=ORF.0.3347_0.667378729511.mRNA
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cpt
parents:
diff changeset
31 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 2030 2032 . - . ID=ORF.0.3347_0.667378729511.rbs-0;Parent=ORF.0.3347_0.667378729511
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cpt
parents:
diff changeset
32 NC_001604 CPT_LipoRy Lipobox 1896 1907 . - . ID=ORF.0.3347_0.667378729511.lipobox;Parent=ORF.0.3347_0.667378729511;sequence=ALSC
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cpt
parents:
diff changeset
33 NC_001604 cpt.fixModel gene 1779 1979 . - . ID=ORF.0.3349_0.219533700187
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cpt
parents:
diff changeset
34 NC_001604 cpt.fixModel mRNA 1779 1979 . - . ID=ORF.0.3349_0.219533700187.mRNA;Parent=ORF.0.3349_0.219533700187
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cpt
parents:
diff changeset
35 NC_001604 getOrfsOrCds CDS 1779 1979 . - 0 ID=ORF.0.3349_0.219533700187.CDS;Parent=ORF.0.3349_0.219533700187.mRNA
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cpt
parents:
diff changeset
36 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1992 1994 . - . ID=ORF.0.3349_0.219533700187.rbs-0;Parent=ORF.0.3349_0.219533700187
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cpt
parents:
diff changeset
37 NC_001604 CPT_LipoRy Lipobox 1896 1907 . - . ID=ORF.0.3349_0.219533700187.lipobox;Parent=ORF.0.3349_0.219533700187;sequence=ALSC
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cpt
parents:
diff changeset
38 NC_001604 cpt.fixModel gene 2467 2652 . - . ID=ORF.0.2946_0.333584772665
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cpt
parents:
diff changeset
39 NC_001604 cpt.fixModel mRNA 2467 2652 . - . ID=ORF.0.2946_0.333584772665.mRNA;Parent=ORF.0.2946_0.333584772665
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cpt
parents:
diff changeset
40 NC_001604 getOrfsOrCds CDS 2467 2652 . - 0 ID=ORF.0.2946_0.333584772665.CDS;Parent=ORF.0.2946_0.333584772665.mRNA
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cpt
parents:
diff changeset
41 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 2658 2661 . - . ID=ORF.0.2946_0.333584772665.rbs-0;Parent=ORF.0.2946_0.333584772665
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cpt
parents:
diff changeset
42 NC_001604 CPT_LipoRy Lipobox 2608 2619 . - . ID=ORF.0.2946_0.333584772665.lipobox;Parent=ORF.0.2946_0.333584772665;sequence=FPLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
43 NC_001604 cpt.fixModel gene 3341 3535 . - . ID=ORF.0.2469_0.735470743882
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cpt
parents:
diff changeset
44 NC_001604 cpt.fixModel mRNA 3341 3535 . - . ID=ORF.0.2469_0.735470743882.mRNA;Parent=ORF.0.2469_0.735470743882
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cpt
parents:
diff changeset
45 NC_001604 getOrfsOrCds CDS 3341 3535 . - 0 ID=ORF.0.2469_0.735470743882.CDS;Parent=ORF.0.2469_0.735470743882.mRNA
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cpt
parents:
diff changeset
46 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 3545 3547 . - . ID=ORF.0.2469_0.735470743882.rbs-0;Parent=ORF.0.2469_0.735470743882
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cpt
parents:
diff changeset
47 NC_001604 CPT_LipoRy Lipobox 3488 3499 . - . ID=ORF.0.2469_0.735470743882.lipobox;Parent=ORF.0.2469_0.735470743882;sequence=LISC
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cpt
parents:
diff changeset
48 NC_001604 cpt.fixModel gene 3444 5822 . + . ID=ORF.0.1457_0.214979578493
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cpt
parents:
diff changeset
49 NC_001604 cpt.fixModel mRNA 3444 5822 . + . ID=ORF.0.1457_0.214979578493.mRNA;Parent=ORF.0.1457_0.214979578493
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cpt
parents:
diff changeset
50 NC_001604 getOrfsOrCds CDS 3444 5822 . + 0 ID=ORF.0.1457_0.214979578493.CDS;Parent=ORF.0.1457_0.214979578493.mRNA
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cpt
parents:
diff changeset
51 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 3433 3435 . + . ID=ORF.0.1457_0.214979578493.rbs-0;Parent=ORF.0.1457_0.214979578493
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cpt
parents:
diff changeset
52 NC_001604 CPT_LipoRy Lipobox 3534 3545 . + . ID=ORF.0.1457_0.214979578493.lipobox;Parent=ORF.0.1457_0.214979578493;sequence=TLAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
53 NC_001604 cpt.fixModel gene 3855 3977 . - . ID=ORF.0.3338_0.822840937084
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cpt
parents:
diff changeset
54 NC_001604 cpt.fixModel mRNA 3855 3977 . - . ID=ORF.0.3338_0.822840937084.mRNA;Parent=ORF.0.3338_0.822840937084
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cpt
parents:
diff changeset
55 NC_001604 getOrfsOrCds CDS 3855 3977 . - 0 ID=ORF.0.3338_0.822840937084.CDS;Parent=ORF.0.3338_0.822840937084.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
56 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 3989 3992 . - . ID=ORF.0.3338_0.822840937084.rbs-0;Parent=ORF.0.3338_0.822840937084
4c72b6accdee Uploaded
cpt
parents:
diff changeset
57 NC_001604 CPT_LipoRy Lipobox 3933 3944 . - . ID=ORF.0.3338_0.822840937084.lipobox;Parent=ORF.0.3338_0.822840937084;sequence=CTGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
58 NC_001604 cpt.fixModel gene 4375 4488 . + . ID=ORF.0.43_0.340613740121
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cpt
parents:
diff changeset
59 NC_001604 cpt.fixModel mRNA 4375 4488 . + . ID=ORF.0.43_0.340613740121.mRNA;Parent=ORF.0.43_0.340613740121
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cpt
parents:
diff changeset
60 NC_001604 getOrfsOrCds CDS 4375 4488 . + 0 ID=ORF.0.43_0.340613740121.CDS;Parent=ORF.0.43_0.340613740121.mRNA
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cpt
parents:
diff changeset
61 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4365 4367 . + . ID=ORF.0.43_0.340613740121.rbs-0;Parent=ORF.0.43_0.340613740121
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cpt
parents:
diff changeset
62 NC_001604 CPT_LipoRy Lipobox 4447 4458 . + . ID=ORF.0.43_0.340613740121.lipobox;Parent=ORF.0.43_0.340613740121;sequence=FTLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
63 NC_001604 cpt.fixModel gene 4428 5822 . + . ID=ORF.0.1499_0.439144727272
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cpt
parents:
diff changeset
64 NC_001604 cpt.fixModel mRNA 4428 5822 . + . ID=ORF.0.1499_0.439144727272.mRNA;Parent=ORF.0.1499_0.439144727272
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cpt
parents:
diff changeset
65 NC_001604 getOrfsOrCds CDS 4428 5822 . + 0 ID=ORF.0.1499_0.439144727272.CDS;Parent=ORF.0.1499_0.439144727272.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
66 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4414 4416 . + . ID=ORF.0.1499_0.439144727272.rbs-0;Parent=ORF.0.1499_0.439144727272
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cpt
parents:
diff changeset
67 NC_001604 CPT_LipoRy Lipobox 4560 4571 . + . ID=ORF.0.1499_0.439144727272.lipobox;Parent=ORF.0.1499_0.439144727272;sequence=GANC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
68 NC_001604 cpt.fixModel gene 4455 5822 . + . ID=ORF.0.1500_0.525693052251
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cpt
parents:
diff changeset
69 NC_001604 cpt.fixModel mRNA 4455 5822 . + . ID=ORF.0.1500_0.525693052251.mRNA;Parent=ORF.0.1500_0.525693052251
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cpt
parents:
diff changeset
70 NC_001604 getOrfsOrCds CDS 4455 5822 . + 0 ID=ORF.0.1500_0.525693052251.CDS;Parent=ORF.0.1500_0.525693052251.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
71 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4440 4442 . + . ID=ORF.0.1500_0.525693052251.rbs-0;Parent=ORF.0.1500_0.525693052251
4c72b6accdee Uploaded
cpt
parents:
diff changeset
72 NC_001604 CPT_LipoRy Lipobox 4635 4646 . + . ID=ORF.0.1500_0.525693052251.lipobox;Parent=ORF.0.1500_0.525693052251;sequence=IMAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
73 NC_001604 cpt.fixModel gene 4485 5822 . + . ID=ORF.0.1502_0.187729321755
4c72b6accdee Uploaded
cpt
parents:
diff changeset
74 NC_001604 cpt.fixModel mRNA 4485 5822 . + . ID=ORF.0.1502_0.187729321755.mRNA;Parent=ORF.0.1502_0.187729321755
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cpt
parents:
diff changeset
75 NC_001604 getOrfsOrCds CDS 4485 5822 . + 0 ID=ORF.0.1502_0.187729321755.CDS;Parent=ORF.0.1502_0.187729321755.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
76 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4475 4478 . + . ID=ORF.0.1502_0.187729321755.rbs-0;Parent=ORF.0.1502_0.187729321755
4c72b6accdee Uploaded
cpt
parents:
diff changeset
77 NC_001604 CPT_LipoRy Lipobox 4635 4646 . + . ID=ORF.0.1502_0.187729321755.lipobox;Parent=ORF.0.1502_0.187729321755;sequence=IMAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
78 NC_001604 cpt.fixModel gene 4638 5822 . + . ID=ORF.0.1511_0.56340825751
4c72b6accdee Uploaded
cpt
parents:
diff changeset
79 NC_001604 cpt.fixModel mRNA 4638 5822 . + . ID=ORF.0.1511_0.56340825751.mRNA;Parent=ORF.0.1511_0.56340825751
4c72b6accdee Uploaded
cpt
parents:
diff changeset
80 NC_001604 getOrfsOrCds CDS 4638 5822 . + 0 ID=ORF.0.1511_0.56340825751.CDS;Parent=ORF.0.1511_0.56340825751.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
81 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4629 4631 . + . ID=ORF.0.1511_0.56340825751.rbs-0;Parent=ORF.0.1511_0.56340825751
4c72b6accdee Uploaded
cpt
parents:
diff changeset
82 NC_001604 CPT_LipoRy Lipobox 4749 4760 . + . ID=ORF.0.1511_0.56340825751.lipobox;Parent=ORF.0.1511_0.56340825751;sequence=SYNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
83 NC_001604 cpt.fixModel gene 4880 4975 . - . ID=ORF.0.2442_0.840871293673
4c72b6accdee Uploaded
cpt
parents:
diff changeset
84 NC_001604 cpt.fixModel mRNA 4880 4975 . - . ID=ORF.0.2442_0.840871293673.mRNA;Parent=ORF.0.2442_0.840871293673
4c72b6accdee Uploaded
cpt
parents:
diff changeset
85 NC_001604 getOrfsOrCds CDS 4880 4975 . - 0 ID=ORF.0.2442_0.840871293673.CDS;Parent=ORF.0.2442_0.840871293673.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
86 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 4985 4987 . - . ID=ORF.0.2442_0.840871293673.rbs-0;Parent=ORF.0.2442_0.840871293673
4c72b6accdee Uploaded
cpt
parents:
diff changeset
87 NC_001604 CPT_LipoRy Lipobox 4916 4927 . - . ID=ORF.0.2442_0.840871293673.lipobox;Parent=ORF.0.2442_0.840871293673;sequence=ASAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
88 NC_001604 cpt.fixModel gene 5677 5781 . + . ID=ORF.0.59_0.635559411884
4c72b6accdee Uploaded
cpt
parents:
diff changeset
89 NC_001604 cpt.fixModel mRNA 5677 5781 . + . ID=ORF.0.59_0.635559411884.mRNA;Parent=ORF.0.59_0.635559411884
4c72b6accdee Uploaded
cpt
parents:
diff changeset
90 NC_001604 getOrfsOrCds CDS 5677 5781 . + 0 ID=ORF.0.59_0.635559411884.CDS;Parent=ORF.0.59_0.635559411884.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
91 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 5666 5668 . + . ID=ORF.0.59_0.635559411884.rbs-0;Parent=ORF.0.59_0.635559411884
4c72b6accdee Uploaded
cpt
parents:
diff changeset
92 NC_001604 CPT_LipoRy Lipobox 5719 5730 . + . ID=ORF.0.59_0.635559411884.lipobox;Parent=ORF.0.59_0.635559411884;sequence=LTSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
93 NC_001604 cpt.fixModel gene 5689 5781 . + . ID=ORF.0.61_0.193819963015
4c72b6accdee Uploaded
cpt
parents:
diff changeset
94 NC_001604 cpt.fixModel mRNA 5689 5781 . + . ID=ORF.0.61_0.193819963015.mRNA;Parent=ORF.0.61_0.193819963015
4c72b6accdee Uploaded
cpt
parents:
diff changeset
95 NC_001604 getOrfsOrCds CDS 5689 5781 . + 0 ID=ORF.0.61_0.193819963015.CDS;Parent=ORF.0.61_0.193819963015.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
96 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 5679 5681 . + . ID=ORF.0.61_0.193819963015.rbs-0;Parent=ORF.0.61_0.193819963015
4c72b6accdee Uploaded
cpt
parents:
diff changeset
97 NC_001604 CPT_LipoRy Lipobox 5719 5730 . + . ID=ORF.0.61_0.193819963015.lipobox;Parent=ORF.0.61_0.193819963015;sequence=LTSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
98 NC_001604 cpt.fixModel gene 6001 6189 . - . ID=ORF.0.2926_0.941001506358
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cpt
parents:
diff changeset
99 NC_001604 cpt.fixModel mRNA 6001 6189 . - . ID=ORF.0.2926_0.941001506358.mRNA;Parent=ORF.0.2926_0.941001506358
4c72b6accdee Uploaded
cpt
parents:
diff changeset
100 NC_001604 getOrfsOrCds CDS 6001 6189 . - 0 ID=ORF.0.2926_0.941001506358.CDS;Parent=ORF.0.2926_0.941001506358.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
101 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 6195 6197 . - . ID=ORF.0.2926_0.941001506358.rbs-0;Parent=ORF.0.2926_0.941001506358
4c72b6accdee Uploaded
cpt
parents:
diff changeset
102 NC_001604 CPT_LipoRy Lipobox 6064 6075 . - . ID=ORF.0.2926_0.941001506358.lipobox;Parent=ORF.0.2926_0.941001506358;sequence=TFGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
103 NC_001604 cpt.fixModel gene 7282 7554 . + . ID=ORF.0.109_0.926945960179
4c72b6accdee Uploaded
cpt
parents:
diff changeset
104 NC_001604 cpt.fixModel mRNA 7282 7554 . + . ID=ORF.0.109_0.926945960179.mRNA;Parent=ORF.0.109_0.926945960179
4c72b6accdee Uploaded
cpt
parents:
diff changeset
105 NC_001604 getOrfsOrCds CDS 7282 7554 . + 0 ID=ORF.0.109_0.926945960179.CDS;Parent=ORF.0.109_0.926945960179.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
106 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 7273 7275 . + . ID=ORF.0.109_0.926945960179.rbs-0;Parent=ORF.0.109_0.926945960179
4c72b6accdee Uploaded
cpt
parents:
diff changeset
107 NC_001604 CPT_LipoRy Lipobox 7444 7455 . + . ID=ORF.0.109_0.926945960179.lipobox;Parent=ORF.0.109_0.926945960179;sequence=GWAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
108 NC_001604 cpt.fixModel gene 7608 7763 . + . ID=ORF.0.1571_0.432752129598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
109 NC_001604 cpt.fixModel mRNA 7608 7763 . + . ID=ORF.0.1571_0.432752129598.mRNA;Parent=ORF.0.1571_0.432752129598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
110 NC_001604 getOrfsOrCds CDS 7608 7763 . + 0 ID=ORF.0.1571_0.432752129598.CDS;Parent=ORF.0.1571_0.432752129598.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
111 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 7596 7600 . + . ID=ORF.0.1571_0.432752129598.rbs-0;Parent=ORF.0.1571_0.432752129598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
112 NC_001604 CPT_LipoRy Lipobox 7728 7739 . + . ID=ORF.0.1571_0.432752129598.lipobox;Parent=ORF.0.1571_0.432752129598;sequence=VCAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
113 NC_001604 cpt.fixModel gene 7791 7880 . + . ID=ORF.0.1576_0.12740804191
4c72b6accdee Uploaded
cpt
parents:
diff changeset
114 NC_001604 cpt.fixModel mRNA 7791 7880 . + . ID=ORF.0.1576_0.12740804191.mRNA;Parent=ORF.0.1576_0.12740804191
4c72b6accdee Uploaded
cpt
parents:
diff changeset
115 NC_001604 getOrfsOrCds CDS 7791 7880 . + 0 ID=ORF.0.1576_0.12740804191.CDS;Parent=ORF.0.1576_0.12740804191.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
116 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 7777 7783 . + . ID=ORF.0.1576_0.12740804191.rbs-0;Parent=ORF.0.1576_0.12740804191
4c72b6accdee Uploaded
cpt
parents:
diff changeset
117 NC_001604 CPT_LipoRy Lipobox 7821 7832 . + . ID=ORF.0.1576_0.12740804191.lipobox;Parent=ORF.0.1576_0.12740804191;sequence=IVGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
118 NC_001604 cpt.fixModel gene 8166 8756 . + . ID=ORF.0.1578_0.507399651779
4c72b6accdee Uploaded
cpt
parents:
diff changeset
119 NC_001604 cpt.fixModel mRNA 8166 8756 . + . ID=ORF.0.1578_0.507399651779.mRNA;Parent=ORF.0.1578_0.507399651779
4c72b6accdee Uploaded
cpt
parents:
diff changeset
120 NC_001604 getOrfsOrCds CDS 8166 8756 . + 0 ID=ORF.0.1578_0.507399651779.CDS;Parent=ORF.0.1578_0.507399651779.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
121 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8153 8159 . + . ID=ORF.0.1578_0.507399651779.rbs-0;Parent=ORF.0.1578_0.507399651779
4c72b6accdee Uploaded
cpt
parents:
diff changeset
122 NC_001604 CPT_LipoRy Lipobox 8226 8237 . + . ID=ORF.0.1578_0.507399651779.lipobox;Parent=ORF.0.1578_0.507399651779;sequence=CIAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
123 NC_001604 cpt.fixModel gene 8255 8383 . - . ID=ORF.0.2415_0.910545970566
4c72b6accdee Uploaded
cpt
parents:
diff changeset
124 NC_001604 cpt.fixModel mRNA 8255 8383 . - . ID=ORF.0.2415_0.910545970566.mRNA;Parent=ORF.0.2415_0.910545970566
4c72b6accdee Uploaded
cpt
parents:
diff changeset
125 NC_001604 getOrfsOrCds CDS 8255 8383 . - 0 ID=ORF.0.2415_0.910545970566.CDS;Parent=ORF.0.2415_0.910545970566.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
126 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8395 8398 . - . ID=ORF.0.2415_0.910545970566.rbs-0;Parent=ORF.0.2415_0.910545970566
4c72b6accdee Uploaded
cpt
parents:
diff changeset
127 NC_001604 CPT_LipoRy Lipobox 8303 8314 . - . ID=ORF.0.2415_0.910545970566.lipobox;Parent=ORF.0.2415_0.910545970566;sequence=IISC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
128 NC_001604 cpt.fixModel gene 8289 8756 . + . ID=ORF.0.1581_0.485792525724
4c72b6accdee Uploaded
cpt
parents:
diff changeset
129 NC_001604 cpt.fixModel mRNA 8289 8756 . + . ID=ORF.0.1581_0.485792525724.mRNA;Parent=ORF.0.1581_0.485792525724
4c72b6accdee Uploaded
cpt
parents:
diff changeset
130 NC_001604 getOrfsOrCds CDS 8289 8756 . + 0 ID=ORF.0.1581_0.485792525724.CDS;Parent=ORF.0.1581_0.485792525724.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
131 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8276 8280 . + . ID=ORF.0.1581_0.485792525724.rbs-0;Parent=ORF.0.1581_0.485792525724
4c72b6accdee Uploaded
cpt
parents:
diff changeset
132 NC_001604 CPT_LipoRy Lipobox 8391 8402 . + . ID=ORF.0.1581_0.485792525724.lipobox;Parent=ORF.0.1581_0.485792525724;sequence=CHLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
133 NC_001604 cpt.fixModel gene 8322 8756 . + . ID=ORF.0.1585_0.203114887634
4c72b6accdee Uploaded
cpt
parents:
diff changeset
134 NC_001604 cpt.fixModel mRNA 8322 8756 . + . ID=ORF.0.1585_0.203114887634.mRNA;Parent=ORF.0.1585_0.203114887634
4c72b6accdee Uploaded
cpt
parents:
diff changeset
135 NC_001604 getOrfsOrCds CDS 8322 8756 . + 0 ID=ORF.0.1585_0.203114887634.CDS;Parent=ORF.0.1585_0.203114887634.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
136 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8307 8309 . + . ID=ORF.0.1585_0.203114887634.rbs-0;Parent=ORF.0.1585_0.203114887634
4c72b6accdee Uploaded
cpt
parents:
diff changeset
137 NC_001604 CPT_LipoRy Lipobox 8391 8402 . + . ID=ORF.0.1585_0.203114887634.lipobox;Parent=ORF.0.1585_0.203114887634;sequence=CHLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
138 NC_001604 cpt.fixModel gene 8355 8756 . + . ID=ORF.0.1587_0.52583318309
4c72b6accdee Uploaded
cpt
parents:
diff changeset
139 NC_001604 cpt.fixModel mRNA 8355 8756 . + . ID=ORF.0.1587_0.52583318309.mRNA;Parent=ORF.0.1587_0.52583318309
4c72b6accdee Uploaded
cpt
parents:
diff changeset
140 NC_001604 getOrfsOrCds CDS 8355 8756 . + 0 ID=ORF.0.1587_0.52583318309.CDS;Parent=ORF.0.1587_0.52583318309.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
141 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8340 8342 . + . ID=ORF.0.1587_0.52583318309.rbs-0;Parent=ORF.0.1587_0.52583318309
4c72b6accdee Uploaded
cpt
parents:
diff changeset
142 NC_001604 CPT_LipoRy Lipobox 8391 8402 . + . ID=ORF.0.1587_0.52583318309.lipobox;Parent=ORF.0.1587_0.52583318309;sequence=CHLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
143 NC_001604 cpt.fixModel gene 8749 8895 . + . ID=ORF.0.128_0.495440600892
4c72b6accdee Uploaded
cpt
parents:
diff changeset
144 NC_001604 cpt.fixModel mRNA 8749 8895 . + . ID=ORF.0.128_0.495440600892.mRNA;Parent=ORF.0.128_0.495440600892
4c72b6accdee Uploaded
cpt
parents:
diff changeset
145 NC_001604 getOrfsOrCds CDS 8749 8895 . + 0 ID=ORF.0.128_0.495440600892.CDS;Parent=ORF.0.128_0.495440600892.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
146 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8737 8740 . + . ID=ORF.0.128_0.495440600892.rbs-0;Parent=ORF.0.128_0.495440600892
4c72b6accdee Uploaded
cpt
parents:
diff changeset
147 NC_001604 CPT_LipoRy Lipobox 8797 8808 . + . ID=ORF.0.128_0.495440600892.lipobox;Parent=ORF.0.128_0.495440600892;sequence=FTSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
148 NC_001604 cpt.fixModel gene 9857 10276 . + . ID=ORF.0.666_0.154209788567
4c72b6accdee Uploaded
cpt
parents:
diff changeset
149 NC_001604 cpt.fixModel mRNA 9857 10276 . + . ID=ORF.0.666_0.154209788567.mRNA;Parent=ORF.0.666_0.154209788567
4c72b6accdee Uploaded
cpt
parents:
diff changeset
150 NC_001604 getOrfsOrCds CDS 9857 10276 . + 0 ID=ORF.0.666_0.154209788567.CDS;Parent=ORF.0.666_0.154209788567.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
151 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 9845 9848 . + . ID=ORF.0.666_0.154209788567.rbs-0;Parent=ORF.0.666_0.154209788567
4c72b6accdee Uploaded
cpt
parents:
diff changeset
152 NC_001604 CPT_LipoRy Lipobox 10028 10039 . + . ID=ORF.0.666_0.154209788567.lipobox;Parent=ORF.0.666_0.154209788567;sequence=LHSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
153 NC_001604 cpt.fixModel gene 9893 10276 . + . ID=ORF.0.670_0.798225643399
4c72b6accdee Uploaded
cpt
parents:
diff changeset
154 NC_001604 cpt.fixModel mRNA 9893 10276 . + . ID=ORF.0.670_0.798225643399.mRNA;Parent=ORF.0.670_0.798225643399
4c72b6accdee Uploaded
cpt
parents:
diff changeset
155 NC_001604 getOrfsOrCds CDS 9893 10276 . + 0 ID=ORF.0.670_0.798225643399.CDS;Parent=ORF.0.670_0.798225643399.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
156 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 9881 9883 . + . ID=ORF.0.670_0.798225643399.rbs-0;Parent=ORF.0.670_0.798225643399
4c72b6accdee Uploaded
cpt
parents:
diff changeset
157 NC_001604 CPT_LipoRy Lipobox 10028 10039 . + . ID=ORF.0.670_0.798225643399.lipobox;Parent=ORF.0.670_0.798225643399;sequence=LHSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
158 NC_001604 cpt.fixModel gene 9953 10276 . + . ID=ORF.0.671_0.995844778527
4c72b6accdee Uploaded
cpt
parents:
diff changeset
159 NC_001604 cpt.fixModel mRNA 9953 10276 . + . ID=ORF.0.671_0.995844778527.mRNA;Parent=ORF.0.671_0.995844778527
4c72b6accdee Uploaded
cpt
parents:
diff changeset
160 NC_001604 getOrfsOrCds CDS 9953 10276 . + 0 ID=ORF.0.671_0.995844778527.CDS;Parent=ORF.0.671_0.995844778527.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
161 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 9941 9944 . + . ID=ORF.0.671_0.995844778527.rbs-0;Parent=ORF.0.671_0.995844778527
4c72b6accdee Uploaded
cpt
parents:
diff changeset
162 NC_001604 CPT_LipoRy Lipobox 10028 10039 . + . ID=ORF.0.671_0.995844778527.lipobox;Parent=ORF.0.671_0.995844778527;sequence=LHSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
163 NC_001604 cpt.fixModel gene 10409 10564 . - . ID=ORF.0.2383_0.0770764235668
4c72b6accdee Uploaded
cpt
parents:
diff changeset
164 NC_001604 cpt.fixModel mRNA 10409 10564 . - . ID=ORF.0.2383_0.0770764235668.mRNA;Parent=ORF.0.2383_0.0770764235668
4c72b6accdee Uploaded
cpt
parents:
diff changeset
165 NC_001604 getOrfsOrCds CDS 10409 10564 . - 0 ID=ORF.0.2383_0.0770764235668.CDS;Parent=ORF.0.2383_0.0770764235668.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
166 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 10570 10573 . - . ID=ORF.0.2383_0.0770764235668.rbs-0;Parent=ORF.0.2383_0.0770764235668
4c72b6accdee Uploaded
cpt
parents:
diff changeset
167 NC_001604 CPT_LipoRy Lipobox 10508 10519 . - . ID=ORF.0.2383_0.0770764235668.lipobox;Parent=ORF.0.2383_0.0770764235668;sequence=SSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
168 NC_001604 cpt.fixModel gene 10580 11011 . - . ID=ORF.0.2367_0.356070282465
4c72b6accdee Uploaded
cpt
parents:
diff changeset
169 NC_001604 cpt.fixModel mRNA 10580 11011 . - . ID=ORF.0.2367_0.356070282465.mRNA;Parent=ORF.0.2367_0.356070282465
4c72b6accdee Uploaded
cpt
parents:
diff changeset
170 NC_001604 getOrfsOrCds CDS 10580 11011 . - 0 ID=ORF.0.2367_0.356070282465.CDS;Parent=ORF.0.2367_0.356070282465.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
171 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 11020 11022 . - . ID=ORF.0.2367_0.356070282465.rbs-0;Parent=ORF.0.2367_0.356070282465
4c72b6accdee Uploaded
cpt
parents:
diff changeset
172 NC_001604 CPT_LipoRy Lipobox 10880 10891 . - . ID=ORF.0.2367_0.356070282465.lipobox;Parent=ORF.0.2367_0.356070282465;sequence=ISSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
173 NC_001604 cpt.fixModel gene 10580 11005 . - . ID=ORF.0.2368_0.206102621609
4c72b6accdee Uploaded
cpt
parents:
diff changeset
174 NC_001604 cpt.fixModel mRNA 10580 11005 . - . ID=ORF.0.2368_0.206102621609.mRNA;Parent=ORF.0.2368_0.206102621609
4c72b6accdee Uploaded
cpt
parents:
diff changeset
175 NC_001604 getOrfsOrCds CDS 10580 11005 . - 0 ID=ORF.0.2368_0.206102621609.CDS;Parent=ORF.0.2368_0.206102621609.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
176 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 11012 11014 . - . ID=ORF.0.2368_0.206102621609.rbs-0;Parent=ORF.0.2368_0.206102621609
4c72b6accdee Uploaded
cpt
parents:
diff changeset
177 NC_001604 CPT_LipoRy Lipobox 10880 10891 . - . ID=ORF.0.2368_0.206102621609.lipobox;Parent=ORF.0.2368_0.206102621609;sequence=ISSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
178 NC_001604 cpt.fixModel gene 12252 13265 . + . ID=ORF.0.1687_0.584434310255
4c72b6accdee Uploaded
cpt
parents:
diff changeset
179 NC_001604 cpt.fixModel mRNA 12252 13265 . + . ID=ORF.0.1687_0.584434310255.mRNA;Parent=ORF.0.1687_0.584434310255
4c72b6accdee Uploaded
cpt
parents:
diff changeset
180 NC_001604 getOrfsOrCds CDS 12252 13265 . + 0 ID=ORF.0.1687_0.584434310255.CDS;Parent=ORF.0.1687_0.584434310255.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
181 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 12244 12246 . + . ID=ORF.0.1687_0.584434310255.rbs-0;Parent=ORF.0.1687_0.584434310255
4c72b6accdee Uploaded
cpt
parents:
diff changeset
182 NC_001604 CPT_LipoRy Lipobox 12429 12440 . + . ID=ORF.0.1687_0.584434310255.lipobox;Parent=ORF.0.1687_0.584434310255;sequence=FSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
183 NC_001604 cpt.fixModel gene 12357 13265 . + . ID=ORF.0.1692_0.946746859523
4c72b6accdee Uploaded
cpt
parents:
diff changeset
184 NC_001604 cpt.fixModel mRNA 12357 13265 . + . ID=ORF.0.1692_0.946746859523.mRNA;Parent=ORF.0.1692_0.946746859523
4c72b6accdee Uploaded
cpt
parents:
diff changeset
185 NC_001604 getOrfsOrCds CDS 12357 13265 . + 0 ID=ORF.0.1692_0.946746859523.CDS;Parent=ORF.0.1692_0.946746859523.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
186 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 12343 12345 . + . ID=ORF.0.1692_0.946746859523.rbs-0;Parent=ORF.0.1692_0.946746859523
4c72b6accdee Uploaded
cpt
parents:
diff changeset
187 NC_001604 CPT_LipoRy Lipobox 12429 12440 . + . ID=ORF.0.1692_0.946746859523.lipobox;Parent=ORF.0.1692_0.946746859523;sequence=FSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
188 NC_001604 cpt.fixModel gene 13451 13540 . - . ID=ORF.0.2329_0.903854413495
4c72b6accdee Uploaded
cpt
parents:
diff changeset
189 NC_001604 cpt.fixModel mRNA 13451 13540 . - . ID=ORF.0.2329_0.903854413495.mRNA;Parent=ORF.0.2329_0.903854413495
4c72b6accdee Uploaded
cpt
parents:
diff changeset
190 NC_001604 getOrfsOrCds CDS 13451 13540 . - 0 ID=ORF.0.2329_0.903854413495.CDS;Parent=ORF.0.2329_0.903854413495.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
191 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 13547 13549 . - . ID=ORF.0.2329_0.903854413495.rbs-0;Parent=ORF.0.2329_0.903854413495
4c72b6accdee Uploaded
cpt
parents:
diff changeset
192 NC_001604 CPT_LipoRy Lipobox 13493 13504 . - . ID=ORF.0.2329_0.903854413495.lipobox;Parent=ORF.0.2329_0.903854413495;sequence=FSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
193 NC_001604 cpt.fixModel gene 13611 13928 . - . ID=ORF.0.3205_0.16043286773
4c72b6accdee Uploaded
cpt
parents:
diff changeset
194 NC_001604 cpt.fixModel mRNA 13611 13928 . - . ID=ORF.0.3205_0.16043286773.mRNA;Parent=ORF.0.3205_0.16043286773
4c72b6accdee Uploaded
cpt
parents:
diff changeset
195 NC_001604 getOrfsOrCds CDS 13611 13928 . - 0 ID=ORF.0.3205_0.16043286773.CDS;Parent=ORF.0.3205_0.16043286773.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
196 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 13934 13937 . - . ID=ORF.0.3205_0.16043286773.rbs-0;Parent=ORF.0.3205_0.16043286773
4c72b6accdee Uploaded
cpt
parents:
diff changeset
197 NC_001604 CPT_LipoRy Lipobox 13791 13802 . - . ID=ORF.0.3205_0.16043286773.lipobox;Parent=ORF.0.3205_0.16043286773;sequence=FMNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
198 NC_001604 cpt.fixModel gene 13611 13877 . - . ID=ORF.0.3211_0.675466343854
4c72b6accdee Uploaded
cpt
parents:
diff changeset
199 NC_001604 cpt.fixModel mRNA 13611 13877 . - . ID=ORF.0.3211_0.675466343854.mRNA;Parent=ORF.0.3211_0.675466343854
4c72b6accdee Uploaded
cpt
parents:
diff changeset
200 NC_001604 getOrfsOrCds CDS 13611 13877 . - 0 ID=ORF.0.3211_0.675466343854.CDS;Parent=ORF.0.3211_0.675466343854.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
201 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 13886 13888 . - . ID=ORF.0.3211_0.675466343854.rbs-0;Parent=ORF.0.3211_0.675466343854
4c72b6accdee Uploaded
cpt
parents:
diff changeset
202 NC_001604 CPT_LipoRy Lipobox 13791 13802 . - . ID=ORF.0.3211_0.675466343854.lipobox;Parent=ORF.0.3211_0.675466343854;sequence=FMNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
203 NC_001604 cpt.fixModel gene 14471 14560 . + . ID=ORF.0.731_0.079213635231
4c72b6accdee Uploaded
cpt
parents:
diff changeset
204 NC_001604 cpt.fixModel mRNA 14471 14560 . + . ID=ORF.0.731_0.079213635231.mRNA;Parent=ORF.0.731_0.079213635231
4c72b6accdee Uploaded
cpt
parents:
diff changeset
205 NC_001604 getOrfsOrCds CDS 14471 14560 . + 0 ID=ORF.0.731_0.079213635231.CDS;Parent=ORF.0.731_0.079213635231.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
206 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 14460 14462 . + . ID=ORF.0.731_0.079213635231.rbs-0;Parent=ORF.0.731_0.079213635231
4c72b6accdee Uploaded
cpt
parents:
diff changeset
207 NC_001604 CPT_LipoRy Lipobox 14513 14524 . + . ID=ORF.0.731_0.079213635231.lipobox;Parent=ORF.0.731_0.079213635231;sequence=VLLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
208 NC_001604 cpt.fixModel gene 15199 15375 . - . ID=ORF.0.2827_0.307040161403
4c72b6accdee Uploaded
cpt
parents:
diff changeset
209 NC_001604 cpt.fixModel mRNA 15199 15375 . - . ID=ORF.0.2827_0.307040161403.mRNA;Parent=ORF.0.2827_0.307040161403
4c72b6accdee Uploaded
cpt
parents:
diff changeset
210 NC_001604 getOrfsOrCds CDS 15199 15375 . - 0 ID=ORF.0.2827_0.307040161403.CDS;Parent=ORF.0.2827_0.307040161403.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
211 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 15388 15390 . - . ID=ORF.0.2827_0.307040161403.rbs-0;Parent=ORF.0.2827_0.307040161403
4c72b6accdee Uploaded
cpt
parents:
diff changeset
212 NC_001604 CPT_LipoRy Lipobox 15265 15276 . - . ID=ORF.0.2827_0.307040161403.lipobox;Parent=ORF.0.2827_0.307040161403;sequence=FSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
213 NC_001604 cpt.fixModel gene 15199 15345 . - . ID=ORF.0.2828_0.260962590428
4c72b6accdee Uploaded
cpt
parents:
diff changeset
214 NC_001604 cpt.fixModel mRNA 15199 15345 . - . ID=ORF.0.2828_0.260962590428.mRNA;Parent=ORF.0.2828_0.260962590428
4c72b6accdee Uploaded
cpt
parents:
diff changeset
215 NC_001604 getOrfsOrCds CDS 15199 15345 . - 0 ID=ORF.0.2828_0.260962590428.CDS;Parent=ORF.0.2828_0.260962590428.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
216 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 15356 15359 . - . ID=ORF.0.2828_0.260962590428.rbs-0;Parent=ORF.0.2828_0.260962590428
4c72b6accdee Uploaded
cpt
parents:
diff changeset
217 NC_001604 CPT_LipoRy Lipobox 15265 15276 . - . ID=ORF.0.2828_0.260962590428.lipobox;Parent=ORF.0.2828_0.260962590428;sequence=FSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
218 NC_001604 cpt.fixModel gene 16519 16839 . + . ID=ORF.0.282_0.151031682754
4c72b6accdee Uploaded
cpt
parents:
diff changeset
219 NC_001604 cpt.fixModel mRNA 16519 16839 . + . ID=ORF.0.282_0.151031682754.mRNA;Parent=ORF.0.282_0.151031682754
4c72b6accdee Uploaded
cpt
parents:
diff changeset
220 NC_001604 getOrfsOrCds CDS 16519 16839 . + 0 ID=ORF.0.282_0.151031682754.CDS;Parent=ORF.0.282_0.151031682754.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
221 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 16504 16506 . + . ID=ORF.0.282_0.151031682754.rbs-0;Parent=ORF.0.282_0.151031682754
4c72b6accdee Uploaded
cpt
parents:
diff changeset
222 NC_001604 CPT_LipoRy Lipobox 16687 16698 . + . ID=ORF.0.282_0.151031682754.lipobox;Parent=ORF.0.282_0.151031682754;sequence=LGGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
223 NC_001604 cpt.fixModel gene 16594 16839 . + . ID=ORF.0.285_0.585284506038
4c72b6accdee Uploaded
cpt
parents:
diff changeset
224 NC_001604 cpt.fixModel mRNA 16594 16839 . + . ID=ORF.0.285_0.585284506038.mRNA;Parent=ORF.0.285_0.585284506038
4c72b6accdee Uploaded
cpt
parents:
diff changeset
225 NC_001604 getOrfsOrCds CDS 16594 16839 . + 0 ID=ORF.0.285_0.585284506038.CDS;Parent=ORF.0.285_0.585284506038.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
226 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 16581 16583 . + . ID=ORF.0.285_0.585284506038.rbs-0;Parent=ORF.0.285_0.585284506038
4c72b6accdee Uploaded
cpt
parents:
diff changeset
227 NC_001604 CPT_LipoRy Lipobox 16687 16698 . + . ID=ORF.0.285_0.585284506038.lipobox;Parent=ORF.0.285_0.585284506038;sequence=LGGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
228 NC_001604 cpt.fixModel gene 16803 17150 . + . ID=ORF.0.1747_0.0552177368642
4c72b6accdee Uploaded
cpt
parents:
diff changeset
229 NC_001604 cpt.fixModel mRNA 16803 17150 . + . ID=ORF.0.1747_0.0552177368642.mRNA;Parent=ORF.0.1747_0.0552177368642
4c72b6accdee Uploaded
cpt
parents:
diff changeset
230 NC_001604 getOrfsOrCds CDS 16803 17150 . + 0 ID=ORF.0.1747_0.0552177368642.CDS;Parent=ORF.0.1747_0.0552177368642.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
231 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 16788 16791 . + . ID=ORF.0.1747_0.0552177368642.rbs-0;Parent=ORF.0.1747_0.0552177368642
4c72b6accdee Uploaded
cpt
parents:
diff changeset
232 NC_001604 CPT_LipoRy Lipobox 16938 16949 . + . ID=ORF.0.1747_0.0552177368642.lipobox;Parent=ORF.0.1747_0.0552177368642;sequence=LHLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
233 NC_001604 cpt.fixModel gene 16851 17150 . + . ID=ORF.0.1751_0.741840163162
4c72b6accdee Uploaded
cpt
parents:
diff changeset
234 NC_001604 cpt.fixModel mRNA 16851 17150 . + . ID=ORF.0.1751_0.741840163162.mRNA;Parent=ORF.0.1751_0.741840163162
4c72b6accdee Uploaded
cpt
parents:
diff changeset
235 NC_001604 getOrfsOrCds CDS 16851 17150 . + 0 ID=ORF.0.1751_0.741840163162.CDS;Parent=ORF.0.1751_0.741840163162.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
236 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 16838 16842 . + . ID=ORF.0.1751_0.741840163162.rbs-0;Parent=ORF.0.1751_0.741840163162
4c72b6accdee Uploaded
cpt
parents:
diff changeset
237 NC_001604 CPT_LipoRy Lipobox 16938 16949 . + . ID=ORF.0.1751_0.741840163162.lipobox;Parent=ORF.0.1751_0.741840163162;sequence=LHLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
238 NC_001604 cpt.fixModel gene 17841 17969 . + . ID=ORF.0.1774_0.274436837056
4c72b6accdee Uploaded
cpt
parents:
diff changeset
239 NC_001604 cpt.fixModel mRNA 17841 17969 . + . ID=ORF.0.1774_0.274436837056.mRNA;Parent=ORF.0.1774_0.274436837056
4c72b6accdee Uploaded
cpt
parents:
diff changeset
240 NC_001604 getOrfsOrCds CDS 17841 17969 . + 0 ID=ORF.0.1774_0.274436837056.CDS;Parent=ORF.0.1774_0.274436837056.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
241 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 17833 17835 . + . ID=ORF.0.1774_0.274436837056.rbs-0;Parent=ORF.0.1774_0.274436837056
4c72b6accdee Uploaded
cpt
parents:
diff changeset
242 NC_001604 CPT_LipoRy Lipobox 17889 17900 . + . ID=ORF.0.1774_0.274436837056.lipobox;Parent=ORF.0.1774_0.274436837056;sequence=VSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
243 NC_001604 cpt.fixModel gene 17850 17969 . + . ID=ORF.0.1775_0.234034637658
4c72b6accdee Uploaded
cpt
parents:
diff changeset
244 NC_001604 cpt.fixModel mRNA 17850 17969 . + . ID=ORF.0.1775_0.234034637658.mRNA;Parent=ORF.0.1775_0.234034637658
4c72b6accdee Uploaded
cpt
parents:
diff changeset
245 NC_001604 getOrfsOrCds CDS 17850 17969 . + 0 ID=ORF.0.1775_0.234034637658.CDS;Parent=ORF.0.1775_0.234034637658.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
246 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 17835 17837 . + . ID=ORF.0.1775_0.234034637658.rbs-0;Parent=ORF.0.1775_0.234034637658
4c72b6accdee Uploaded
cpt
parents:
diff changeset
247 NC_001604 CPT_LipoRy Lipobox 17889 17900 . + . ID=ORF.0.1775_0.234034637658.lipobox;Parent=ORF.0.1775_0.234034637658;sequence=VSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
248 NC_001604 cpt.fixModel gene 17853 17969 . + . ID=ORF.0.1776_0.956678283472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
249 NC_001604 cpt.fixModel mRNA 17853 17969 . + . ID=ORF.0.1776_0.956678283472.mRNA;Parent=ORF.0.1776_0.956678283472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
250 NC_001604 getOrfsOrCds CDS 17853 17969 . + 0 ID=ORF.0.1776_0.956678283472.CDS;Parent=ORF.0.1776_0.956678283472.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
251 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 17843 17845 . + . ID=ORF.0.1776_0.956678283472.rbs-0;Parent=ORF.0.1776_0.956678283472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
252 NC_001604 CPT_LipoRy Lipobox 17889 17900 . + . ID=ORF.0.1776_0.956678283472.lipobox;Parent=ORF.0.1776_0.956678283472;sequence=VSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
253 NC_001604 cpt.fixModel gene 17918 18406 . + . ID=ORF.0.808_0.284208778955
4c72b6accdee Uploaded
cpt
parents:
diff changeset
254 NC_001604 cpt.fixModel mRNA 17918 18406 . + . ID=ORF.0.808_0.284208778955.mRNA;Parent=ORF.0.808_0.284208778955
4c72b6accdee Uploaded
cpt
parents:
diff changeset
255 NC_001604 getOrfsOrCds CDS 17918 18406 . + 0 ID=ORF.0.808_0.284208778955.CDS;Parent=ORF.0.808_0.284208778955.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
256 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 17905 17908 . + . ID=ORF.0.808_0.284208778955.rbs-0;Parent=ORF.0.808_0.284208778955
4c72b6accdee Uploaded
cpt
parents:
diff changeset
257 NC_001604 CPT_LipoRy Lipobox 17999 18010 . + . ID=ORF.0.808_0.284208778955.lipobox;Parent=ORF.0.808_0.284208778955;sequence=IPNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
258 NC_001604 cpt.fixModel gene 18375 18503 . + . ID=ORF.0.1782_0.36618964442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
259 NC_001604 cpt.fixModel mRNA 18375 18503 . + . ID=ORF.0.1782_0.36618964442.mRNA;Parent=ORF.0.1782_0.36618964442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
260 NC_001604 getOrfsOrCds CDS 18375 18503 . + 0 ID=ORF.0.1782_0.36618964442.CDS;Parent=ORF.0.1782_0.36618964442.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
261 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 18362 18364 . + . ID=ORF.0.1782_0.36618964442.rbs-0;Parent=ORF.0.1782_0.36618964442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
262 NC_001604 CPT_LipoRy Lipobox 18420 18431 . + . ID=ORF.0.1782_0.36618964442.lipobox;Parent=ORF.0.1782_0.36618964442;sequence=GSLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
263 NC_001604 cpt.fixModel gene 18605 18859 . + . ID=ORF.0.827_0.0796993206003
4c72b6accdee Uploaded
cpt
parents:
diff changeset
264 NC_001604 cpt.fixModel mRNA 18605 18859 . + . ID=ORF.0.827_0.0796993206003.mRNA;Parent=ORF.0.827_0.0796993206003
4c72b6accdee Uploaded
cpt
parents:
diff changeset
265 NC_001604 getOrfsOrCds CDS 18605 18859 . + 0 ID=ORF.0.827_0.0796993206003.CDS;Parent=ORF.0.827_0.0796993206003.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
266 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 18591 18594 . + . ID=ORF.0.827_0.0796993206003.rbs-0;Parent=ORF.0.827_0.0796993206003
4c72b6accdee Uploaded
cpt
parents:
diff changeset
267 NC_001604 CPT_LipoRy Lipobox 18740 18751 . + . ID=ORF.0.827_0.0796993206003.lipobox;Parent=ORF.0.827_0.0796993206003;sequence=ANGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
268 NC_001604 cpt.fixModel gene 19127 19531 . + . ID=ORF.0.834_0.84724977775
4c72b6accdee Uploaded
cpt
parents:
diff changeset
269 NC_001604 cpt.fixModel mRNA 19127 19531 . + . ID=ORF.0.834_0.84724977775.mRNA;Parent=ORF.0.834_0.84724977775
4c72b6accdee Uploaded
cpt
parents:
diff changeset
270 NC_001604 getOrfsOrCds CDS 19127 19531 . + 0 ID=ORF.0.834_0.84724977775.CDS;Parent=ORF.0.834_0.84724977775.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
271 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19116 19121 . + . ID=ORF.0.834_0.84724977775.rbs-0;Parent=ORF.0.834_0.84724977775
4c72b6accdee Uploaded
cpt
parents:
diff changeset
272 NC_001604 CPT_LipoRy Lipobox 19265 19276 . + . ID=ORF.0.834_0.84724977775.lipobox;Parent=ORF.0.834_0.84724977775;sequence=MSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
273 NC_001604 cpt.fixModel gene 19130 19531 . + . ID=ORF.0.835_0.198028099199
4c72b6accdee Uploaded
cpt
parents:
diff changeset
274 NC_001604 cpt.fixModel mRNA 19130 19531 . + . ID=ORF.0.835_0.198028099199.mRNA;Parent=ORF.0.835_0.198028099199
4c72b6accdee Uploaded
cpt
parents:
diff changeset
275 NC_001604 getOrfsOrCds CDS 19130 19531 . + 0 ID=ORF.0.835_0.198028099199.CDS;Parent=ORF.0.835_0.198028099199.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
276 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19116 19121 . + . ID=ORF.0.835_0.198028099199.rbs-0;Parent=ORF.0.835_0.198028099199
4c72b6accdee Uploaded
cpt
parents:
diff changeset
277 NC_001604 CPT_LipoRy Lipobox 19265 19276 . + . ID=ORF.0.835_0.198028099199.lipobox;Parent=ORF.0.835_0.198028099199;sequence=MSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
278 NC_001604 cpt.fixModel gene 19146 19250 . + . ID=ORF.0.1797_0.0971524354331
4c72b6accdee Uploaded
cpt
parents:
diff changeset
279 NC_001604 cpt.fixModel mRNA 19146 19250 . + . ID=ORF.0.1797_0.0971524354331.mRNA;Parent=ORF.0.1797_0.0971524354331
4c72b6accdee Uploaded
cpt
parents:
diff changeset
280 NC_001604 getOrfsOrCds CDS 19146 19250 . + 0 ID=ORF.0.1797_0.0971524354331.CDS;Parent=ORF.0.1797_0.0971524354331.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
281 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19136 19138 . + . ID=ORF.0.1797_0.0971524354331.rbs-0;Parent=ORF.0.1797_0.0971524354331
4c72b6accdee Uploaded
cpt
parents:
diff changeset
282 NC_001604 CPT_LipoRy Lipobox 19194 19205 . + . ID=ORF.0.1797_0.0971524354331.lipobox;Parent=ORF.0.1797_0.0971524354331;sequence=TLGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
283 NC_001604 cpt.fixModel gene 19148 19531 . + . ID=ORF.0.836_0.601498128182
4c72b6accdee Uploaded
cpt
parents:
diff changeset
284 NC_001604 cpt.fixModel mRNA 19148 19531 . + . ID=ORF.0.836_0.601498128182.mRNA;Parent=ORF.0.836_0.601498128182
4c72b6accdee Uploaded
cpt
parents:
diff changeset
285 NC_001604 getOrfsOrCds CDS 19148 19531 . + 0 ID=ORF.0.836_0.601498128182.CDS;Parent=ORF.0.836_0.601498128182.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
286 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19136 19138 . + . ID=ORF.0.836_0.601498128182.rbs-0;Parent=ORF.0.836_0.601498128182
4c72b6accdee Uploaded
cpt
parents:
diff changeset
287 NC_001604 CPT_LipoRy Lipobox 19265 19276 . + . ID=ORF.0.836_0.601498128182.lipobox;Parent=ORF.0.836_0.601498128182;sequence=MSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
288 NC_001604 cpt.fixModel gene 19187 19531 . + . ID=ORF.0.838_0.552072337694
4c72b6accdee Uploaded
cpt
parents:
diff changeset
289 NC_001604 cpt.fixModel mRNA 19187 19531 . + . ID=ORF.0.838_0.552072337694.mRNA;Parent=ORF.0.838_0.552072337694
4c72b6accdee Uploaded
cpt
parents:
diff changeset
290 NC_001604 getOrfsOrCds CDS 19187 19531 . + 0 ID=ORF.0.838_0.552072337694.CDS;Parent=ORF.0.838_0.552072337694.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
291 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19179 19181 . + . ID=ORF.0.838_0.552072337694.rbs-0;Parent=ORF.0.838_0.552072337694
4c72b6accdee Uploaded
cpt
parents:
diff changeset
292 NC_001604 CPT_LipoRy Lipobox 19331 19342 . + . ID=ORF.0.838_0.552072337694.lipobox;Parent=ORF.0.838_0.552072337694;sequence=CVSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
293 NC_001604 cpt.fixModel gene 19202 19531 . + . ID=ORF.0.839_0.741052455962
4c72b6accdee Uploaded
cpt
parents:
diff changeset
294 NC_001604 cpt.fixModel mRNA 19202 19531 . + . ID=ORF.0.839_0.741052455962.mRNA;Parent=ORF.0.839_0.741052455962
4c72b6accdee Uploaded
cpt
parents:
diff changeset
295 NC_001604 getOrfsOrCds CDS 19202 19531 . + 0 ID=ORF.0.839_0.741052455962.CDS;Parent=ORF.0.839_0.741052455962.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
296 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19189 19191 . + . ID=ORF.0.839_0.741052455962.rbs-0;Parent=ORF.0.839_0.741052455962
4c72b6accdee Uploaded
cpt
parents:
diff changeset
297 NC_001604 CPT_LipoRy Lipobox 19331 19342 . + . ID=ORF.0.839_0.741052455962.lipobox;Parent=ORF.0.839_0.741052455962;sequence=CVSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
298 NC_001604 cpt.fixModel gene 19229 19531 . + . ID=ORF.0.840_0.512729086502
4c72b6accdee Uploaded
cpt
parents:
diff changeset
299 NC_001604 cpt.fixModel mRNA 19229 19531 . + . ID=ORF.0.840_0.512729086502.mRNA;Parent=ORF.0.840_0.512729086502
4c72b6accdee Uploaded
cpt
parents:
diff changeset
300 NC_001604 getOrfsOrCds CDS 19229 19531 . + 0 ID=ORF.0.840_0.512729086502.CDS;Parent=ORF.0.840_0.512729086502.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
301 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19219 19222 . + . ID=ORF.0.840_0.512729086502.rbs-0;Parent=ORF.0.840_0.512729086502
4c72b6accdee Uploaded
cpt
parents:
diff changeset
302 NC_001604 CPT_LipoRy Lipobox 19331 19342 . + . ID=ORF.0.840_0.512729086502.lipobox;Parent=ORF.0.840_0.512729086502;sequence=CVSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
303 NC_001604 cpt.fixModel gene 19348 19764 . - . ID=ORF.0.2751_0.199850521186
4c72b6accdee Uploaded
cpt
parents:
diff changeset
304 NC_001604 cpt.fixModel mRNA 19348 19764 . - . ID=ORF.0.2751_0.199850521186.mRNA;Parent=ORF.0.2751_0.199850521186
4c72b6accdee Uploaded
cpt
parents:
diff changeset
305 NC_001604 getOrfsOrCds CDS 19348 19764 . - 0 ID=ORF.0.2751_0.199850521186.CDS;Parent=ORF.0.2751_0.199850521186.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
306 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19770 19772 . - . ID=ORF.0.2751_0.199850521186.rbs-0;Parent=ORF.0.2751_0.199850521186
4c72b6accdee Uploaded
cpt
parents:
diff changeset
307 NC_001604 CPT_LipoRy Lipobox 19684 19695 . - . ID=ORF.0.2751_0.199850521186.lipobox;Parent=ORF.0.2751_0.199850521186;sequence=AAAC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
308 NC_001604 cpt.fixModel gene 20240 21850 . + . ID=ORF.0.857_0.30133479257
4c72b6accdee Uploaded
cpt
parents:
diff changeset
309 NC_001604 cpt.fixModel mRNA 20240 21850 . + . ID=ORF.0.857_0.30133479257.mRNA;Parent=ORF.0.857_0.30133479257
4c72b6accdee Uploaded
cpt
parents:
diff changeset
310 NC_001604 getOrfsOrCds CDS 20240 21850 . + 0 ID=ORF.0.857_0.30133479257.CDS;Parent=ORF.0.857_0.30133479257.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
311 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 20227 20230 . + . ID=ORF.0.857_0.30133479257.rbs-0;Parent=ORF.0.857_0.30133479257
4c72b6accdee Uploaded
cpt
parents:
diff changeset
312 NC_001604 CPT_LipoRy Lipobox 20330 20341 . + . ID=ORF.0.857_0.30133479257.lipobox;Parent=ORF.0.857_0.30133479257;sequence=AQNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
313 NC_001604 cpt.fixModel gene 21847 22131 . - . ID=ORF.0.2711_0.405563765295
4c72b6accdee Uploaded
cpt
parents:
diff changeset
314 NC_001604 cpt.fixModel mRNA 21847 22131 . - . ID=ORF.0.2711_0.405563765295.mRNA;Parent=ORF.0.2711_0.405563765295
4c72b6accdee Uploaded
cpt
parents:
diff changeset
315 NC_001604 getOrfsOrCds CDS 21847 22131 . - 0 ID=ORF.0.2711_0.405563765295.CDS;Parent=ORF.0.2711_0.405563765295.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
316 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 22137 22140 . - . ID=ORF.0.2711_0.405563765295.rbs-0;Parent=ORF.0.2711_0.405563765295
4c72b6accdee Uploaded
cpt
parents:
diff changeset
317 NC_001604 CPT_LipoRy Lipobox 22027 22038 . - . ID=ORF.0.2711_0.405563765295.lipobox;Parent=ORF.0.2711_0.405563765295;sequence=FCSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
318 NC_001604 cpt.fixModel gene 22171 22380 . - . ID=ORF.0.2706_0.647869144577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
319 NC_001604 cpt.fixModel mRNA 22171 22380 . - . ID=ORF.0.2706_0.647869144577.mRNA;Parent=ORF.0.2706_0.647869144577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
320 NC_001604 getOrfsOrCds CDS 22171 22380 . - 0 ID=ORF.0.2706_0.647869144577.CDS;Parent=ORF.0.2706_0.647869144577.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
321 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 22389 22391 . - . ID=ORF.0.2706_0.647869144577.rbs-0;Parent=ORF.0.2706_0.647869144577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
322 NC_001604 CPT_LipoRy Lipobox 22303 22314 . - . ID=ORF.0.2706_0.647869144577.lipobox;Parent=ORF.0.2706_0.647869144577;sequence=SPSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
323 NC_001604 cpt.fixModel gene 22171 22365 . - . ID=ORF.0.2707_0.824850750578
4c72b6accdee Uploaded
cpt
parents:
diff changeset
324 NC_001604 cpt.fixModel mRNA 22171 22365 . - . ID=ORF.0.2707_0.824850750578.mRNA;Parent=ORF.0.2707_0.824850750578
4c72b6accdee Uploaded
cpt
parents:
diff changeset
325 NC_001604 getOrfsOrCds CDS 22171 22365 . - 0 ID=ORF.0.2707_0.824850750578.CDS;Parent=ORF.0.2707_0.824850750578.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
326 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 22376 22378 . - . ID=ORF.0.2707_0.824850750578.rbs-0;Parent=ORF.0.2707_0.824850750578
4c72b6accdee Uploaded
cpt
parents:
diff changeset
327 NC_001604 CPT_LipoRy Lipobox 22303 22314 . - . ID=ORF.0.2707_0.824850750578.lipobox;Parent=ORF.0.2707_0.824850750578;sequence=SPSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
328 NC_001604 cpt.fixModel gene 23303 24004 . + . ID=ORF.0.992_0.0628398583098
4c72b6accdee Uploaded
cpt
parents:
diff changeset
329 NC_001604 cpt.fixModel mRNA 23303 24004 . + . ID=ORF.0.992_0.0628398583098.mRNA;Parent=ORF.0.992_0.0628398583098
4c72b6accdee Uploaded
cpt
parents:
diff changeset
330 NC_001604 getOrfsOrCds CDS 23303 24004 . + 0 ID=ORF.0.992_0.0628398583098.CDS;Parent=ORF.0.992_0.0628398583098.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
331 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 23294 23297 . + . ID=ORF.0.992_0.0628398583098.rbs-0;Parent=ORF.0.992_0.0628398583098
4c72b6accdee Uploaded
cpt
parents:
diff changeset
332 NC_001604 CPT_LipoRy Lipobox 23393 23404 . + . ID=ORF.0.992_0.0628398583098.lipobox;Parent=ORF.0.992_0.0628398583098;sequence=AGLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
333 NC_001604 cpt.fixModel gene 23342 24004 . + . ID=ORF.0.993_0.137302872597
4c72b6accdee Uploaded
cpt
parents:
diff changeset
334 NC_001604 cpt.fixModel mRNA 23342 24004 . + . ID=ORF.0.993_0.137302872597.mRNA;Parent=ORF.0.993_0.137302872597
4c72b6accdee Uploaded
cpt
parents:
diff changeset
335 NC_001604 getOrfsOrCds CDS 23342 24004 . + 0 ID=ORF.0.993_0.137302872597.CDS;Parent=ORF.0.993_0.137302872597.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
336 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 23327 23329 . + . ID=ORF.0.993_0.137302872597.rbs-0;Parent=ORF.0.993_0.137302872597
4c72b6accdee Uploaded
cpt
parents:
diff changeset
337 NC_001604 CPT_LipoRy Lipobox 23393 23404 . + . ID=ORF.0.993_0.137302872597.lipobox;Parent=ORF.0.993_0.137302872597;sequence=AGLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
338 NC_001604 cpt.fixModel gene 23360 24004 . + . ID=ORF.0.995_0.947816373168
4c72b6accdee Uploaded
cpt
parents:
diff changeset
339 NC_001604 cpt.fixModel mRNA 23360 24004 . + . ID=ORF.0.995_0.947816373168.mRNA;Parent=ORF.0.995_0.947816373168
4c72b6accdee Uploaded
cpt
parents:
diff changeset
340 NC_001604 getOrfsOrCds CDS 23360 24004 . + 0 ID=ORF.0.995_0.947816373168.CDS;Parent=ORF.0.995_0.947816373168.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
341 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 23345 23347 . + . ID=ORF.0.995_0.947816373168.rbs-0;Parent=ORF.0.995_0.947816373168
4c72b6accdee Uploaded
cpt
parents:
diff changeset
342 NC_001604 CPT_LipoRy Lipobox 23393 23404 . + . ID=ORF.0.995_0.947816373168.lipobox;Parent=ORF.0.995_0.947816373168;sequence=AGLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
343 NC_001604 cpt.fixModel gene 23751 23861 . + . ID=ORF.0.1858_0.446816749041
4c72b6accdee Uploaded
cpt
parents:
diff changeset
344 NC_001604 cpt.fixModel mRNA 23751 23861 . + . ID=ORF.0.1858_0.446816749041.mRNA;Parent=ORF.0.1858_0.446816749041
4c72b6accdee Uploaded
cpt
parents:
diff changeset
345 NC_001604 getOrfsOrCds CDS 23751 23861 . + 0 ID=ORF.0.1858_0.446816749041.CDS;Parent=ORF.0.1858_0.446816749041.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
346 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 23741 23743 . + . ID=ORF.0.1858_0.446816749041.rbs-0;Parent=ORF.0.1858_0.446816749041
4c72b6accdee Uploaded
cpt
parents:
diff changeset
347 NC_001604 CPT_LipoRy Lipobox 23835 23846 . + . ID=ORF.0.1858_0.446816749041.lipobox;Parent=ORF.0.1858_0.446816749041;sequence=ACSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
348 NC_001604 cpt.fixModel gene 26196 26435 . + . ID=ORF.0.1900_0.395270115201
4c72b6accdee Uploaded
cpt
parents:
diff changeset
349 NC_001604 cpt.fixModel mRNA 26196 26435 . + . ID=ORF.0.1900_0.395270115201.mRNA;Parent=ORF.0.1900_0.395270115201
4c72b6accdee Uploaded
cpt
parents:
diff changeset
350 NC_001604 getOrfsOrCds CDS 26196 26435 . + 0 ID=ORF.0.1900_0.395270115201.CDS;Parent=ORF.0.1900_0.395270115201.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
351 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 26184 26186 . + . ID=ORF.0.1900_0.395270115201.rbs-0;Parent=ORF.0.1900_0.395270115201
4c72b6accdee Uploaded
cpt
parents:
diff changeset
352 NC_001604 CPT_LipoRy Lipobox 26259 26270 . + . ID=ORF.0.1900_0.395270115201.lipobox;Parent=ORF.0.1900_0.395270115201;sequence=TTLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
353 NC_001604 cpt.fixModel gene 26202 26435 . + . ID=ORF.0.1901_0.947459771709
4c72b6accdee Uploaded
cpt
parents:
diff changeset
354 NC_001604 cpt.fixModel mRNA 26202 26435 . + . ID=ORF.0.1901_0.947459771709.mRNA;Parent=ORF.0.1901_0.947459771709
4c72b6accdee Uploaded
cpt
parents:
diff changeset
355 NC_001604 getOrfsOrCds CDS 26202 26435 . + 0 ID=ORF.0.1901_0.947459771709.CDS;Parent=ORF.0.1901_0.947459771709.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
356 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 26188 26190 . + . ID=ORF.0.1901_0.947459771709.rbs-0;Parent=ORF.0.1901_0.947459771709
4c72b6accdee Uploaded
cpt
parents:
diff changeset
357 NC_001604 CPT_LipoRy Lipobox 26259 26270 . + . ID=ORF.0.1901_0.947459771709.lipobox;Parent=ORF.0.1901_0.947459771709;sequence=TTLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
358 NC_001604 cpt.fixModel gene 26211 26435 . + . ID=ORF.0.1902_0.529677364227
4c72b6accdee Uploaded
cpt
parents:
diff changeset
359 NC_001604 cpt.fixModel mRNA 26211 26435 . + . ID=ORF.0.1902_0.529677364227.mRNA;Parent=ORF.0.1902_0.529677364227
4c72b6accdee Uploaded
cpt
parents:
diff changeset
360 NC_001604 getOrfsOrCds CDS 26211 26435 . + 0 ID=ORF.0.1902_0.529677364227.CDS;Parent=ORF.0.1902_0.529677364227.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
361 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 26199 26201 . + . ID=ORF.0.1902_0.529677364227.rbs-0;Parent=ORF.0.1902_0.529677364227
4c72b6accdee Uploaded
cpt
parents:
diff changeset
362 NC_001604 CPT_LipoRy Lipobox 26259 26270 . + . ID=ORF.0.1902_0.529677364227.lipobox;Parent=ORF.0.1902_0.529677364227;sequence=TTLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
363 NC_001604 cpt.fixModel gene 27032 27226 . + . ID=ORF.0.1110_0.659690370089
4c72b6accdee Uploaded
cpt
parents:
diff changeset
364 NC_001604 cpt.fixModel mRNA 27032 27226 . + . ID=ORF.0.1110_0.659690370089.mRNA;Parent=ORF.0.1110_0.659690370089
4c72b6accdee Uploaded
cpt
parents:
diff changeset
365 NC_001604 getOrfsOrCds CDS 27032 27226 . + 0 ID=ORF.0.1110_0.659690370089.CDS;Parent=ORF.0.1110_0.659690370089.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
366 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 27021 27023 . + . ID=ORF.0.1110_0.659690370089.rbs-0;Parent=ORF.0.1110_0.659690370089
4c72b6accdee Uploaded
cpt
parents:
diff changeset
367 NC_001604 CPT_LipoRy Lipobox 27173 27184 . + . ID=ORF.0.1110_0.659690370089.lipobox;Parent=ORF.0.1110_0.659690370089;sequence=IIGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
368 NC_001604 cpt.fixModel gene 27307 27723 . + . ID=ORF.0.316_0.909704516637
4c72b6accdee Uploaded
cpt
parents:
diff changeset
369 NC_001604 cpt.fixModel mRNA 27307 27723 . + . ID=ORF.0.316_0.909704516637.mRNA;Parent=ORF.0.316_0.909704516637
4c72b6accdee Uploaded
cpt
parents:
diff changeset
370 NC_001604 getOrfsOrCds CDS 27307 27723 . + 0 ID=ORF.0.316_0.909704516637.CDS;Parent=ORF.0.316_0.909704516637.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
371 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 27294 27298 . + . ID=ORF.0.316_0.909704516637.rbs-0;Parent=ORF.0.316_0.909704516637
4c72b6accdee Uploaded
cpt
parents:
diff changeset
372 NC_001604 CPT_LipoRy Lipobox 27463 27474 . + . ID=ORF.0.316_0.909704516637.lipobox;Parent=ORF.0.316_0.909704516637;sequence=GGNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
373 NC_001604 cpt.fixModel gene 27310 27723 . + . ID=ORF.0.317_0.772851906945
4c72b6accdee Uploaded
cpt
parents:
diff changeset
374 NC_001604 cpt.fixModel mRNA 27310 27723 . + . ID=ORF.0.317_0.772851906945.mRNA;Parent=ORF.0.317_0.772851906945
4c72b6accdee Uploaded
cpt
parents:
diff changeset
375 NC_001604 getOrfsOrCds CDS 27310 27723 . + 0 ID=ORF.0.317_0.772851906945.CDS;Parent=ORF.0.317_0.772851906945.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
376 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 27297 27300 . + . ID=ORF.0.317_0.772851906945.rbs-0;Parent=ORF.0.317_0.772851906945
4c72b6accdee Uploaded
cpt
parents:
diff changeset
377 NC_001604 CPT_LipoRy Lipobox 27463 27474 . + . ID=ORF.0.317_0.772851906945.lipobox;Parent=ORF.0.317_0.772851906945;sequence=GGNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
378 NC_001604 cpt.fixModel gene 27433 27723 . + . ID=ORF.0.321_0.0639466467061
4c72b6accdee Uploaded
cpt
parents:
diff changeset
379 NC_001604 cpt.fixModel mRNA 27433 27723 . + . ID=ORF.0.321_0.0639466467061.mRNA;Parent=ORF.0.321_0.0639466467061
4c72b6accdee Uploaded
cpt
parents:
diff changeset
380 NC_001604 getOrfsOrCds CDS 27433 27723 . + 0 ID=ORF.0.321_0.0639466467061.CDS;Parent=ORF.0.321_0.0639466467061.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
381 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 27421 27423 . + . ID=ORF.0.321_0.0639466467061.rbs-0;Parent=ORF.0.321_0.0639466467061
4c72b6accdee Uploaded
cpt
parents:
diff changeset
382 NC_001604 CPT_LipoRy Lipobox 27463 27474 . + . ID=ORF.0.321_0.0639466467061.lipobox;Parent=ORF.0.321_0.0639466467061;sequence=GGNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
383 NC_001604 cpt.fixModel gene 28184 28360 . - . ID=ORF.0.2143_0.413406715024
4c72b6accdee Uploaded
cpt
parents:
diff changeset
384 NC_001604 cpt.fixModel mRNA 28184 28360 . - . ID=ORF.0.2143_0.413406715024.mRNA;Parent=ORF.0.2143_0.413406715024
4c72b6accdee Uploaded
cpt
parents:
diff changeset
385 NC_001604 getOrfsOrCds CDS 28184 28360 . - 0 ID=ORF.0.2143_0.413406715024.CDS;Parent=ORF.0.2143_0.413406715024.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
386 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 28371 28373 . - . ID=ORF.0.2143_0.413406715024.rbs-0;Parent=ORF.0.2143_0.413406715024
4c72b6accdee Uploaded
cpt
parents:
diff changeset
387 NC_001604 CPT_LipoRy Lipobox 28268 28279 . - . ID=ORF.0.2143_0.413406715024.lipobox;Parent=ORF.0.2143_0.413406715024;sequence=CLSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
388 NC_001604 cpt.fixModel gene 28184 28351 . - . ID=ORF.0.2144_0.655595263383
4c72b6accdee Uploaded
cpt
parents:
diff changeset
389 NC_001604 cpt.fixModel mRNA 28184 28351 . - . ID=ORF.0.2144_0.655595263383.mRNA;Parent=ORF.0.2144_0.655595263383
4c72b6accdee Uploaded
cpt
parents:
diff changeset
390 NC_001604 getOrfsOrCds CDS 28184 28351 . - 0 ID=ORF.0.2144_0.655595263383.CDS;Parent=ORF.0.2144_0.655595263383.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
391 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 28360 28362 . - . ID=ORF.0.2144_0.655595263383.rbs-0;Parent=ORF.0.2144_0.655595263383
4c72b6accdee Uploaded
cpt
parents:
diff changeset
392 NC_001604 CPT_LipoRy Lipobox 28268 28279 . - . ID=ORF.0.2144_0.655595263383.lipobox;Parent=ORF.0.2144_0.655595263383;sequence=CLSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
393 NC_001604 cpt.fixModel gene 29038 29148 . - . ID=ORF.0.2627_0.865400195799
4c72b6accdee Uploaded
cpt
parents:
diff changeset
394 NC_001604 cpt.fixModel mRNA 29038 29148 . - . ID=ORF.0.2627_0.865400195799.mRNA;Parent=ORF.0.2627_0.865400195799
4c72b6accdee Uploaded
cpt
parents:
diff changeset
395 NC_001604 getOrfsOrCds CDS 29038 29148 . - 0 ID=ORF.0.2627_0.865400195799.CDS;Parent=ORF.0.2627_0.865400195799.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
396 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 29157 29159 . - . ID=ORF.0.2627_0.865400195799.rbs-0;Parent=ORF.0.2627_0.865400195799
4c72b6accdee Uploaded
cpt
parents:
diff changeset
397 NC_001604 CPT_LipoRy Lipobox 29047 29058 . - . ID=ORF.0.2627_0.865400195799.lipobox;Parent=ORF.0.2627_0.865400195799;sequence=LISC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
398 NC_001604 cpt.fixModel gene 30569 30709 . - . ID=ORF.0.2092_0.128402710833
4c72b6accdee Uploaded
cpt
parents:
diff changeset
399 NC_001604 cpt.fixModel mRNA 30569 30709 . - . ID=ORF.0.2092_0.128402710833.mRNA;Parent=ORF.0.2092_0.128402710833
4c72b6accdee Uploaded
cpt
parents:
diff changeset
400 NC_001604 getOrfsOrCds CDS 30569 30709 . - 0 ID=ORF.0.2092_0.128402710833.CDS;Parent=ORF.0.2092_0.128402710833.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
401 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 30718 30720 . - . ID=ORF.0.2092_0.128402710833.rbs-0;Parent=ORF.0.2092_0.128402710833
4c72b6accdee Uploaded
cpt
parents:
diff changeset
402 NC_001604 CPT_LipoRy Lipobox 30578 30589 . - . ID=ORF.0.2092_0.128402710833.lipobox;Parent=ORF.0.2092_0.128402710833;sequence=ASLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
403 NC_001604 cpt.fixModel gene 30672 30902 . - . ID=ORF.0.3082_0.766125556504
4c72b6accdee Uploaded
cpt
parents:
diff changeset
404 NC_001604 cpt.fixModel mRNA 30672 30902 . - . ID=ORF.0.3082_0.766125556504.mRNA;Parent=ORF.0.3082_0.766125556504
4c72b6accdee Uploaded
cpt
parents:
diff changeset
405 NC_001604 getOrfsOrCds CDS 30672 30902 . - 0 ID=ORF.0.3082_0.766125556504.CDS;Parent=ORF.0.3082_0.766125556504.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
406 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 30909 30911 . - . ID=ORF.0.3082_0.766125556504.rbs-0;Parent=ORF.0.3082_0.766125556504
4c72b6accdee Uploaded
cpt
parents:
diff changeset
407 NC_001604 CPT_LipoRy Lipobox 30756 30767 . - . ID=ORF.0.3082_0.766125556504.lipobox;Parent=ORF.0.3082_0.766125556504;sequence=LVNC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
408 NC_001604 cpt.fixModel gene 31040 31144 . - . ID=ORF.0.2090_0.755340496691
4c72b6accdee Uploaded
cpt
parents:
diff changeset
409 NC_001604 cpt.fixModel mRNA 31040 31144 . - . ID=ORF.0.2090_0.755340496691.mRNA;Parent=ORF.0.2090_0.755340496691
4c72b6accdee Uploaded
cpt
parents:
diff changeset
410 NC_001604 getOrfsOrCds CDS 31040 31144 . - 0 ID=ORF.0.2090_0.755340496691.CDS;Parent=ORF.0.2090_0.755340496691.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
411 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 31152 31155 . - . ID=ORF.0.2090_0.755340496691.rbs-0;Parent=ORF.0.2090_0.755340496691
4c72b6accdee Uploaded
cpt
parents:
diff changeset
412 NC_001604 CPT_LipoRy Lipobox 31070 31081 . - . ID=ORF.0.2090_0.755340496691.lipobox;Parent=ORF.0.2090_0.755340496691;sequence=LGLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
413 NC_001604 cpt.fixModel gene 31125 31379 . - . ID=ORF.0.3071_0.185167330335
4c72b6accdee Uploaded
cpt
parents:
diff changeset
414 NC_001604 cpt.fixModel mRNA 31125 31379 . - . ID=ORF.0.3071_0.185167330335.mRNA;Parent=ORF.0.3071_0.185167330335
4c72b6accdee Uploaded
cpt
parents:
diff changeset
415 NC_001604 getOrfsOrCds CDS 31125 31379 . - 0 ID=ORF.0.3071_0.185167330335.CDS;Parent=ORF.0.3071_0.185167330335.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
416 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 31391 31393 . - . ID=ORF.0.3071_0.185167330335.rbs-0;Parent=ORF.0.3071_0.185167330335
4c72b6accdee Uploaded
cpt
parents:
diff changeset
417 NC_001604 CPT_LipoRy Lipobox 31188 31199 . - . ID=ORF.0.3071_0.185167330335.lipobox;Parent=ORF.0.3071_0.185167330335;sequence=VASC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
418 NC_001604 cpt.fixModel gene 31125 31259 . - . ID=ORF.0.3076_0.188149499635
4c72b6accdee Uploaded
cpt
parents:
diff changeset
419 NC_001604 cpt.fixModel mRNA 31125 31259 . - . ID=ORF.0.3076_0.188149499635.mRNA;Parent=ORF.0.3076_0.188149499635
4c72b6accdee Uploaded
cpt
parents:
diff changeset
420 NC_001604 getOrfsOrCds CDS 31125 31259 . - 0 ID=ORF.0.3076_0.188149499635.CDS;Parent=ORF.0.3076_0.188149499635.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
421 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 31270 31273 . - . ID=ORF.0.3076_0.188149499635.rbs-0;Parent=ORF.0.3076_0.188149499635
4c72b6accdee Uploaded
cpt
parents:
diff changeset
422 NC_001604 CPT_LipoRy Lipobox 31143 31154 . - . ID=ORF.0.3076_0.188149499635.lipobox;Parent=ORF.0.3076_0.188149499635;sequence=GSSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
423 NC_001604 cpt.fixModel gene 31768 31974 . - . ID=ORF.0.2592_0.643398083603
4c72b6accdee Uploaded
cpt
parents:
diff changeset
424 NC_001604 cpt.fixModel mRNA 31768 31974 . - . ID=ORF.0.2592_0.643398083603.mRNA;Parent=ORF.0.2592_0.643398083603
4c72b6accdee Uploaded
cpt
parents:
diff changeset
425 NC_001604 getOrfsOrCds CDS 31768 31974 . - 0 ID=ORF.0.2592_0.643398083603.CDS;Parent=ORF.0.2592_0.643398083603.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
426 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 31982 31984 . - . ID=ORF.0.2592_0.643398083603.rbs-0;Parent=ORF.0.2592_0.643398083603
4c72b6accdee Uploaded
cpt
parents:
diff changeset
427 NC_001604 CPT_LipoRy Lipobox 31906 31917 . - . ID=ORF.0.2592_0.643398083603.lipobox;Parent=ORF.0.2592_0.643398083603;sequence=GVSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
428 NC_001604 cpt.fixModel gene 33345 33572 . - . ID=ORF.0.3027_0.898941439735
4c72b6accdee Uploaded
cpt
parents:
diff changeset
429 NC_001604 cpt.fixModel mRNA 33345 33572 . - . ID=ORF.0.3027_0.898941439735.mRNA;Parent=ORF.0.3027_0.898941439735
4c72b6accdee Uploaded
cpt
parents:
diff changeset
430 NC_001604 getOrfsOrCds CDS 33345 33572 . - 0 ID=ORF.0.3027_0.898941439735.CDS;Parent=ORF.0.3027_0.898941439735.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
431 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 33578 33581 . - . ID=ORF.0.3027_0.898941439735.rbs-0;Parent=ORF.0.3027_0.898941439735
4c72b6accdee Uploaded
cpt
parents:
diff changeset
432 NC_001604 CPT_LipoRy Lipobox 33522 33533 . - . ID=ORF.0.3027_0.898941439735.lipobox;Parent=ORF.0.3027_0.898941439735;sequence=ASSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
433 NC_001604 cpt.fixModel gene 35128 35496 . - . ID=ORF.0.2553_0.319093082442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
434 NC_001604 cpt.fixModel mRNA 35128 35496 . - . ID=ORF.0.2553_0.319093082442.mRNA;Parent=ORF.0.2553_0.319093082442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
435 NC_001604 getOrfsOrCds CDS 35128 35496 . - 0 ID=ORF.0.2553_0.319093082442.CDS;Parent=ORF.0.2553_0.319093082442.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
436 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 35508 35510 . - . ID=ORF.0.2553_0.319093082442.rbs-0;Parent=ORF.0.2553_0.319093082442
4c72b6accdee Uploaded
cpt
parents:
diff changeset
437 NC_001604 CPT_LipoRy Lipobox 35353 35364 . - . ID=ORF.0.2553_0.319093082442.lipobox;Parent=ORF.0.2553_0.319093082442;sequence=VSGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
438 NC_001604 cpt.fixModel gene 36743 36898 . + . ID=ORF.0.1318_0.942257676054
4c72b6accdee Uploaded
cpt
parents:
diff changeset
439 NC_001604 cpt.fixModel mRNA 36743 36898 . + . ID=ORF.0.1318_0.942257676054.mRNA;Parent=ORF.0.1318_0.942257676054
4c72b6accdee Uploaded
cpt
parents:
diff changeset
440 NC_001604 getOrfsOrCds CDS 36743 36898 . + 0 ID=ORF.0.1318_0.942257676054.CDS;Parent=ORF.0.1318_0.942257676054.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
441 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 36735 36737 . + . ID=ORF.0.1318_0.942257676054.rbs-0;Parent=ORF.0.1318_0.942257676054
4c72b6accdee Uploaded
cpt
parents:
diff changeset
442 NC_001604 CPT_LipoRy Lipobox 36851 36862 . + . ID=ORF.0.1318_0.942257676054.lipobox;Parent=ORF.0.1318_0.942257676054;sequence=LYGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
443 NC_001604 cpt.fixModel gene 36749 36898 . + . ID=ORF.0.1320_0.465020155472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
444 NC_001604 cpt.fixModel mRNA 36749 36898 . + . ID=ORF.0.1320_0.465020155472.mRNA;Parent=ORF.0.1320_0.465020155472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
445 NC_001604 getOrfsOrCds CDS 36749 36898 . + 0 ID=ORF.0.1320_0.465020155472.CDS;Parent=ORF.0.1320_0.465020155472.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
446 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 36735 36738 . + . ID=ORF.0.1320_0.465020155472.rbs-0;Parent=ORF.0.1320_0.465020155472
4c72b6accdee Uploaded
cpt
parents:
diff changeset
447 NC_001604 CPT_LipoRy Lipobox 36851 36862 . + . ID=ORF.0.1320_0.465020155472.lipobox;Parent=ORF.0.1320_0.465020155472;sequence=LYGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
448 NC_001604 cpt.fixModel gene 36779 36898 . + . ID=ORF.0.1322_0.214220607598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
449 NC_001604 cpt.fixModel mRNA 36779 36898 . + . ID=ORF.0.1322_0.214220607598.mRNA;Parent=ORF.0.1322_0.214220607598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
450 NC_001604 getOrfsOrCds CDS 36779 36898 . + 0 ID=ORF.0.1322_0.214220607598.CDS;Parent=ORF.0.1322_0.214220607598.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
451 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 36769 36771 . + . ID=ORF.0.1322_0.214220607598.rbs-0;Parent=ORF.0.1322_0.214220607598
4c72b6accdee Uploaded
cpt
parents:
diff changeset
452 NC_001604 CPT_LipoRy Lipobox 36851 36862 . + . ID=ORF.0.1322_0.214220607598.lipobox;Parent=ORF.0.1322_0.214220607598;sequence=LYGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
453 NC_001604 cpt.fixModel gene 36797 36898 . + . ID=ORF.0.1324_0.149247979479
4c72b6accdee Uploaded
cpt
parents:
diff changeset
454 NC_001604 cpt.fixModel mRNA 36797 36898 . + . ID=ORF.0.1324_0.149247979479.mRNA;Parent=ORF.0.1324_0.149247979479
4c72b6accdee Uploaded
cpt
parents:
diff changeset
455 NC_001604 getOrfsOrCds CDS 36797 36898 . + 0 ID=ORF.0.1324_0.149247979479.CDS;Parent=ORF.0.1324_0.149247979479.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
456 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 36787 36789 . + . ID=ORF.0.1324_0.149247979479.rbs-0;Parent=ORF.0.1324_0.149247979479
4c72b6accdee Uploaded
cpt
parents:
diff changeset
457 NC_001604 CPT_LipoRy Lipobox 36851 36862 . + . ID=ORF.0.1324_0.149247979479.lipobox;Parent=ORF.0.1324_0.149247979479;sequence=LYGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
458 NC_001604 cpt.fixModel gene 36800 36898 . + . ID=ORF.0.1325_0.813429946488
4c72b6accdee Uploaded
cpt
parents:
diff changeset
459 NC_001604 cpt.fixModel mRNA 36800 36898 . + . ID=ORF.0.1325_0.813429946488.mRNA;Parent=ORF.0.1325_0.813429946488
4c72b6accdee Uploaded
cpt
parents:
diff changeset
460 NC_001604 getOrfsOrCds CDS 36800 36898 . + 0 ID=ORF.0.1325_0.813429946488.CDS;Parent=ORF.0.1325_0.813429946488.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
461 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 36787 36789 . + . ID=ORF.0.1325_0.813429946488.rbs-0;Parent=ORF.0.1325_0.813429946488
4c72b6accdee Uploaded
cpt
parents:
diff changeset
462 NC_001604 CPT_LipoRy Lipobox 36851 36862 . + . ID=ORF.0.1325_0.813429946488.lipobox;Parent=ORF.0.1325_0.813429946488;sequence=LYGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
463 NC_001604 cpt.fixModel gene 37032 37283 . + . ID=ORF.0.1961_0.261039005028
4c72b6accdee Uploaded
cpt
parents:
diff changeset
464 NC_001604 cpt.fixModel mRNA 37032 37283 . + . ID=ORF.0.1961_0.261039005028.mRNA;Parent=ORF.0.1961_0.261039005028
4c72b6accdee Uploaded
cpt
parents:
diff changeset
465 NC_001604 getOrfsOrCds CDS 37032 37283 . + 0 ID=ORF.0.1961_0.261039005028.CDS;Parent=ORF.0.1961_0.261039005028.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
466 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 37020 37026 . + . ID=ORF.0.1961_0.261039005028.rbs-0;Parent=ORF.0.1961_0.261039005028
4c72b6accdee Uploaded
cpt
parents:
diff changeset
467 NC_001604 CPT_LipoRy Lipobox 37167 37178 . + . ID=ORF.0.1961_0.261039005028.lipobox;Parent=ORF.0.1961_0.261039005028;sequence=ISGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
468 NC_001604 cpt.fixModel gene 37083 37283 . + . ID=ORF.0.1964_0.894779255809
4c72b6accdee Uploaded
cpt
parents:
diff changeset
469 NC_001604 cpt.fixModel mRNA 37083 37283 . + . ID=ORF.0.1964_0.894779255809.mRNA;Parent=ORF.0.1964_0.894779255809
4c72b6accdee Uploaded
cpt
parents:
diff changeset
470 NC_001604 getOrfsOrCds CDS 37083 37283 . + 0 ID=ORF.0.1964_0.894779255809.CDS;Parent=ORF.0.1964_0.894779255809.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
471 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 37074 37076 . + . ID=ORF.0.1964_0.894779255809.rbs-0;Parent=ORF.0.1964_0.894779255809
4c72b6accdee Uploaded
cpt
parents:
diff changeset
472 NC_001604 CPT_LipoRy Lipobox 37167 37178 . + . ID=ORF.0.1964_0.894779255809.lipobox;Parent=ORF.0.1964_0.894779255809;sequence=ISGC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
473 NC_001604 cpt.fixModel gene 37213 37368 . - . ID=ORF.0.2528_0.841717806577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
474 NC_001604 cpt.fixModel mRNA 37213 37368 . - . ID=ORF.0.2528_0.841717806577.mRNA;Parent=ORF.0.2528_0.841717806577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
475 NC_001604 getOrfsOrCds CDS 37213 37368 . - 0 ID=ORF.0.2528_0.841717806577.CDS;Parent=ORF.0.2528_0.841717806577.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
476 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 37377 37379 . - . ID=ORF.0.2528_0.841717806577.rbs-0;Parent=ORF.0.2528_0.841717806577
4c72b6accdee Uploaded
cpt
parents:
diff changeset
477 NC_001604 CPT_LipoRy Lipobox 37315 37326 . - . ID=ORF.0.2528_0.841717806577.lipobox;Parent=ORF.0.2528_0.841717806577;sequence=IVSC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
478 NC_001604 cpt.fixModel gene 38016 38273 . + . ID=ORF.0.1988_0.755408274882
4c72b6accdee Uploaded
cpt
parents:
diff changeset
479 NC_001604 cpt.fixModel mRNA 38016 38273 . + . ID=ORF.0.1988_0.755408274882.mRNA;Parent=ORF.0.1988_0.755408274882
4c72b6accdee Uploaded
cpt
parents:
diff changeset
480 NC_001604 getOrfsOrCds CDS 38016 38273 . + 0 ID=ORF.0.1988_0.755408274882.CDS;Parent=ORF.0.1988_0.755408274882.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
481 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 38006 38009 . + . ID=ORF.0.1988_0.755408274882.rbs-0;Parent=ORF.0.1988_0.755408274882
4c72b6accdee Uploaded
cpt
parents:
diff changeset
482 NC_001604 CPT_LipoRy Lipobox 38091 38102 . + . ID=ORF.0.1988_0.755408274882.lipobox;Parent=ORF.0.1988_0.755408274882;sequence=LLLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
483 NC_001604 cpt.fixModel gene 38376 38513 . + . ID=ORF.0.2003_0.337942263367
4c72b6accdee Uploaded
cpt
parents:
diff changeset
484 NC_001604 cpt.fixModel mRNA 38376 38513 . + . ID=ORF.0.2003_0.337942263367.mRNA;Parent=ORF.0.2003_0.337942263367
4c72b6accdee Uploaded
cpt
parents:
diff changeset
485 NC_001604 getOrfsOrCds CDS 38376 38513 . + 0 ID=ORF.0.2003_0.337942263367.CDS;Parent=ORF.0.2003_0.337942263367.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
486 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 38361 38364 . + . ID=ORF.0.2003_0.337942263367.rbs-0;Parent=ORF.0.2003_0.337942263367
4c72b6accdee Uploaded
cpt
parents:
diff changeset
487 NC_001604 CPT_LipoRy Lipobox 38490 38501 . + . ID=ORF.0.2003_0.337942263367.lipobox;Parent=ORF.0.2003_0.337942263367;sequence=VTLC
4c72b6accdee Uploaded
cpt
parents:
diff changeset
488 NC_001604 cpt.fixModel gene 39389 39538 . + . ID=ORF.0.1414_0.296990322019
4c72b6accdee Uploaded
cpt
parents:
diff changeset
489 NC_001604 cpt.fixModel mRNA 39389 39538 . + . ID=ORF.0.1414_0.296990322019.mRNA;Parent=ORF.0.1414_0.296990322019
4c72b6accdee Uploaded
cpt
parents:
diff changeset
490 NC_001604 getOrfsOrCds CDS 39389 39538 . + 0 ID=ORF.0.1414_0.296990322019.CDS;Parent=ORF.0.1414_0.296990322019.mRNA
4c72b6accdee Uploaded
cpt
parents:
diff changeset
491 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 39378 39382 . + . ID=ORF.0.1414_0.296990322019.rbs-0;Parent=ORF.0.1414_0.296990322019
4c72b6accdee Uploaded
cpt
parents:
diff changeset
492 NC_001604 CPT_LipoRy Lipobox 39443 39454 . + . ID=ORF.0.1414_0.296990322019.lipobox;Parent=ORF.0.1414_0.296990322019;sequence=VVLC