cpt_progressivemauve: cpt_progressivemauve/test-data/karma.fa comparison

comparison cpt_progressivemauve/test-data/karma.fa @ 0:69795939c29b draft

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author	cpt
date	Fri, 10 Jun 2022 08:41:20 +0000
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comparison

equal deleted inserted replaced

--1:000000000000
+:69795939c29b
+>karma
+gggctctgggcgaagttttgtgggactactatgacttgcattatttcaagcgcaagcggt
+ccgagtggaagtaccaaagatttgctttggtttatcaacaacttgccgacgcggcctcgg
+acacctccatcgcgtccaagtttcagacctacgatcacctgccccacctggagccgaagg
+tgctcaaggcccggcttgacgcgggtcacgccgacgagcgcgggcggccgattccggacc
+gcaaggagcacttccggcgggtggtggtcagcgtcgactcggccaacaagcccggcgccc
+gcaacgactacagcgtcgcccaggtctggggggagacccacgcccgcaagcactacctga
+tctaccaggagcgcaagaaggtcgacatcaccggcctgaccgagatgatcgagcgggtgg
+ccaagcgctacgaggtcgacgccatcctggtcgaagacaagggcaacggcaccgcctaca
+tccaggcgcggggccagaccgacagccagcggcggctcgccccggccccgatcgaggcga
+tccaggtcccgagcacctattccaaggagttccgcttcaacgagatcgtcccgatgatcg
+aggccggcgaggtcttcctgccgggcaaggccccgtggctcgacctgctgatccgcgaaa
+tcggtcagttccccgaaggcgcccatgacgaccaagtcgacgccatgacgcagtacctcc
+gctgggccaagtccaagcgcacgcggttcggcgcgcgcaaggtcggctcgatgggctgac
+gaggcccgttaaccacgtttgttaacctccgccggggccttaaccctaacacggcgaggg
+ttaacaggtccagggacccttcgaaattaacctttcggggaccctgggaaatcgtaaggc
+agggaccctggccattttccggctggggaccctggcaaattcaccgccggggaccctccg
+aaattcatcctcggggaccctggcaaatcaaggagccggcgatggccgaatttctcgccc
+tgatccccaacctcgcgccgttcctggtctggggaatcctcctctggatcgccgccgagg
+tggtctggagcgtctgcctctgggtctatggcctgcggaccctgttcaagttgcaccgcg
+atgatctggccgaggcgatcagcttcgagcgggccttgagccccttcgactaggcgcggc
+ctgccgacctaagtcacggactgtaggtttcgtgacaaggtgagatattccacaacgatt
+tcaaaggcttactgcgatgtcgatccgcacgttcttccacgatctggccgtccgtttcgt
+cgttttggggtggatttttgcccgaaaaccgctgaaatgggctccaaaagggcataattt
+tcagcctaaaccgccggtccaggtcggcgccctggcggccggctcgctcctcgccctcag
+tctggcgctcggcgggctctggttccgcttcacgtttccggacaaaagtcaagtggtctc
+gcgccggccgcaggctatgtcatagaccgtgggcttcgtgaccagatcacgcttccgtta
+ccgctccagcccttgtgaggcctcggatgttcgcctttctccgccggctcagcctcgccg
+ccgtccatggcgtgctctgggcgatcctcctggcgatgctcgccctgggcgggccgcgcc
+gcccgctctaaagcgtcatatctgacgcctaaggccccctaaggcctcatctgtgagaca
+ttcaacgccctcgtgttcctctgaacgcgggggcgttttgacgtcggcgcatttttgact
+tgacgcgcgagcgttttgacgcgggcgcatttttgattcgacgggcgagcgttttgacgt
+ccgagcatttttcaacttgacgtcgttccatttaccgggagcgccttagggttaacgccg
+gccgccgagccctggggcgatttaccaccgccacgttaacctaacgcctgttaacctatc
+ggttgttaaggttaacgccccgttagggttaacgccccttaaccctgcccgcgttaaggt
+taacgcgccccggcccaggccctacccgttaaccttaaccgcccgacccccgcgcccagg
+ccatacccggtagggcctgacggccctaccgggtatgaccccgcgccccggcggaggcca
+gggaccgccccggcgctttttcgcgccccgtttaccttttgttaacgtctggcctctagg
+gtcgcccttgtccccgccgcactcccgcgccgggcaaggagcttcccgccatggtccccg
+actcgatcatgaacccccgcgaccacttccaccgcctgcgcgaggaaaccgcccgcgctc
+tggtcgaggccttcgccgaatccgaccccggcgaggattaccgcgccgaggaaaaggccg
+gcgcgtgggttgtcgcctattacgacgcggcgggcgaattcgtcgcctatctctagccgc
+cttcgccccctggcgccgcgttaacggtttgttaacatgtcggcgccagggtcgccctag
+cccggcgcgtcgccgcgccttcggagaaaaccgccatgctctacacccccgccgcccgcc
+gccttcgcggctatcgcgaaaccgccgcgaagaacgccgaaattcacgcccgcccgcaca
+tggccggcaacgtcgccggctacaacgagtcggtgtggccgacgacggcgctaggcgtcg
+ccgccaaggccggcgccttcaagcgccccgaaaccgccggcaactggtcggaggatcgca
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+aatacgtcgccgggaccgcccatagtgaatgggacggggtgaccctctaccccgccgacc
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+ggccgaagccaaggccaagcgtgacgccgaaaaggccgccaaggcgcgccgcgaagccga
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+aggcgcggccgtgccgtgggaacacgcggtcaaggccttccggttcatcaagctttgccg
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+tgacgcgatcagcccgaacggggacatgacggccggttgtcaccggttcgcgtgggatga
+aatcgaacgcctcgccagggccgaaggggttttcgacctccccgccgacgctggcgccgt
+cgaaacccggcaagccgaaccggcctaagcctccccgcccctctcgcgccccggctcccc
+gccggggcgttttcgtgtacgcggtaaccttttgttaacttctggcctctagggtgactt
+tcgccgccgggcaatcccgcccgccggccaaggatcgcagactatgaatcttttcgttgt
+cgccattgaccccgccctcatcccttcggccgccggcttcgtggtcgcctccccctacgg
+gtgcggcaagtggcgcgcgtgcgtcgggagcgaggcggacatgatcgcgcttcgcgacaa
+gatgcgccgcgcgcacccggccccggaaggctacagcgtccagcccctggcgtcgttcct
+ggcctatctggagacggtcggggatagcccttatgaccggttccgcgcccatgacgccgc
+cgcccgcatccttgacaccctgacgacgcatctcgccgcctagccccgccaagcccccgg
+ccgcgcgccgggggcgctttccctcgaaaggatcgccgaccatgacaacccgtcttatcg
+ccgttcgcggcccgaccgccgccgaactcgccgacccgtccagccgcgcgggcggcgccg
+aagtcgttttcgagcgccgcgaccgcgaaggccgcacgcgccttgtgttcgcctcgacct
+gctacggctcatatcagcaatggggcgaaacccgcgacgtgctcgccgacaacgtcgagg
+cggtcacgctctgggccgaaggcatggcggccgttgccgccctcatcgacgagagcgacg
+acgacgacgagagcgacgacgccccggccgaagatgacgacggggaggcgtgagccatgc
+gcacaaccaaggctcaacgcttcgccgccatcgcctttgacgccctggccaaggccctaa
+gcgagccgcgccaagccgtcgcccgcgtgaccaaatgggagggcgcgggccatagcttcg
+ccaacctgcaacgcgattatgagcggtacggccccggcgcccgctcatggttcggccggg
+ctgaaatgcgcttctttgggacgcgcctagaggccgcgccgctggatttcccggcgctgg
+gctgcaccctctttctgacctccgaaaccccgcccggcgccggccgggtctggacccttc
+gcgcctatgtctgggcttcggccgatatcaccacgctaacccatggcgacgaaaccgacg
+cggcgaccgcgcaagcggcctttgacctgctttggcgggtcctttccggacagtaacctt
+ttgttaacttctgcccgctagggtcttcttgcggccgggcaatcccgcccggccgcatct
+tggagacagcgcccatgacccgcgctcaagccctcgccgacatgaacgcccttcccggta
+tcatcgcctcctttgagcgcgagacgggcgaatatcgcgtgaccctgcgctttggcccgc
+tccccatggggcgcggcgcccaagagtggatgcgcgcgcgccgcgaagccgtcgccagct
+acagcgacgacaaggccgacgccctggccaccgcccgcgacatgtccgcccgctgggagg
+cgatgagcgccgaagagcgttcgcgcctctatcacaaccccgcctaagaccccgcgcgcc
+gccctggccttcgccggggcggctccctcaacccctcgcaaggatcgcaccccatgaccg
+cccgtaagcccctgaccaaggaacaaaaggcccgccgccgcgcgacccgccgcgccgccc
+gcctcaactggtcggatgagcgccgcgctcgcgaattcgagcgtcaagcccgcttcttcc
+tgatgatcgccacccgcgcccaaggcgccggccaaggccaggaagccgcccgcctcgcca
+cggtcgcacaacgcaaggtgactaactggcgcatggcgcaggcctgcgcccggattaacg
+ccctggccgcgcatccgttcgcggccgtggtcgcctaaggaggcccgcccgatgacgcac
+cctcacgccctggcgctgatcgccctcgccgaaaaggtgttaccgcttacccggctgcac
+ccgctcgaccaacgcgccgccgccgtcgatctaatcggcgacctctaccgcctcgccgac
+gatatcgacgcgaccccgcaagcccccgccctgacgcaaccgaaggccgcctaagccatg
+aacccgaaccgctaccgcctcgcgccccgcgaccgcttcagccgtgagcttgccgaaacg
+ctctatcaggcggccgaagccgtcgcccgcgtgattccgctcatgccggagtccgccccc
+gatgagcgccgcgcgctgggcaaggtccgcgccgaccttctaacccatagcgccggcgcc
+cttgttcccaagccgccggccgccgtgctcgaaaccctcgtttgggttgtcgagatggcg
+caagatcgcgcgactaacgccgatttcaacaccgcccaagaaggactcgacgagcacgag
+tccctagcctttgtcgccgactggctggaagccgaaggccaggacgtgacgccgattcgc
+aacgcgcaaccgtccgccgacgccctggccgaactcgccgcccgccgcgacgccgaacaa
+gcggcgctagacgccttggaggccgaagccctggccgaagcgccgggcgacgtgatcacc
+gacgccttgcgcccctatctgggcgccgccctggccgaaaaccacgccgacgacgtgcta
+gacgccctcacgcgcgccggcttccaaatcacccgcaaggaggcctaaagcccatgaccg
+actccgccaagatcaccggcgcgctcgcgctactcgccatcgcggccgataatctccgcc
+aaggcccggccatgtccaaggccgccgacaacgtcaccaacgtctgtaactacgccctga
+cgcgcgcgaccatgctcaaggccgccgaccaaatcggcgaggcgctggaggcgctgggcg
+ccctgcaagcgggcggctatgtgatcgcccgccgccgcgacgttttcaccgatgcgggcg
+agaagctgggcgacctgttggcggcgctttatgacgccgtcccgaactacgccgtaagat
+cgcagcgcctcgccgacgccctgagtcccgcgcgaaattacgtctatcagccccggttcc
+gggtcaagctggacgccgcgcccggcgcgcttttgaccgactgcgacacgggcgcaacgg
+tctatttccagccgggcgacgacgccgacgccttccgggccgaattcgccccgtgggttc
+acgccgccaacgtgacggccgaaggcgcggccctggcctcgatgatgaacccgaccgccg
+aagagtatttcagccccgccacgggggtctaacgcccgtggccctgaccttcgccccgca
+atcgacgcgctacgccgtggaagtccccgaacgcgactttctggccctgacccgcgccga
+ggaaattctagcccctggcccctatctggagccgtcgcttagcgagcgtttggaggcgca
+agccggcgtttgggatgtcgagtataacggccatttcggcgcggccgtttacttgacgct
+cgacgttgacgccgactccccggccgcccgcgacgccctggcctcgatcatcgccgacca
+actggccaaggccaaggcgtggaagcgccagcccgcctaagtcatcattcctatcgtcta
+tgacttgtcaccggccgaactcttgcccggtgacagtctgggcaagtaaagctcactctg
+gattttatgacttagcgcaaaggattgaaattgctcgaaaaattcctcgaagctcacaaa
+gttgttttctggctgcttttgctggcctgtttgtggcgcttttaacggtttgttaacccc
+tggccctctagggtcgaattcccggcgcggcaatcccgccgcccggccttccttcggagc
+ttctgatcatgttcgcttccgtgacccttcccgcccatgacgcccaaggcctgagcctcg
+aaaccgtccacatggttttcgcccgcgaactggcgcaacatttcgaccacgtgatttccg
+cccccgtggtcgaaagctggcgcgacgaggacaccggcgccgaccacgcgcaagccgccg
+tttgcttcaccgtctcggcgacccccgccgcgtgggaagccaagggcgggcgcctcgcgc
+gccggctggaaaacctcgccgcgcgctatgccgccgactgcgacgccccggccctgactg
+tcacccactgcgacggccaaacggtctatgtcggcgctctggaagccctggcgcgccccg
+ccccggtgcaaggcccgacccgtgaggcggacccggctttcctcccccgccagcgtgagg
+acaaggccgcccgcttcgatcgcctgaccgcctagcccctggcctccccctagcgcaccg
+cccctagaaaggcggtgcgcttttctgtgtctgtttacttgttgttaaggaatagcctgc
+tagtgtccccttgttggcggacgcatcccgcgcccgcccctttctggatcgctccccatg
+gctcgcccctctgacctgctcaacgtcaacgccgcccgcgtcctggcttgccttgagcct
+atcgccgccgccgctaagaccgccccggccgccgaccgcgccgccctttcctacctgctc
+gacgctggcgagtatgtcgccgcgtggcgccgcaacctcacggaaaccgaccgccgcaag
+gcctatggcgcggcctgcgccgccgaagccctggcgctcgctaacgcctatcagcccgcc
+accctgcaaggcggcgccgtccgccgcgctctgggcgcctatgccgccgccctaaaggtc
+ctgctagacggggagccggtcaaggcggtgcgcgccgccgaaggcgcggcgctttcggtc
+cgcgctcgctacgccaacacccgcctttaacctcttgttaacacctcccggctatggtcg
+ggaggtcgcaaggagacacccgacatgacccgccccggccccgcctcgctcctgaccccg
+caagcccgcttctcgtcgccgcgcgtcctgatccttccgggcgcggctcccatgccgatt
+cgccagccgcgcggcctttgcgccgtcgagtgcgtcgcccttggcgtgacgctgggcgcg
+gcgctctacctcgccgcccgcgtgttcggtctggtctgaccagacccccgccccgccccc
+ggtcggaccggtcgggggtgtgtcccataatgacacacccccgccacctagtatcttttt
+tgattcggagggacccaaaggccccctacgttaaccatttttggcggcgccccccggcgc
+ctacggatcattttgaaaaatcgcgttgacaaaaccggcaatcaacgtcaaggatcgtga
+cgtcgagcagccctgcccgacacgggcggcccgccccccattcgccgcccgacggcccca
+tctccgacgtccaccgggggtggggccttttcattttccagccgggggacccaaggcccc
+ctggctttgtaaatcggatcgccaaaaggtccctccaaaaattttcaaaaccagaaacgc
+ccggttgacacttccagacttggcttctaagtgttgcgcgacgacacgcaatcgaggagc
+ccgtcatgaccgacgacatcaccaacgccaccccctaccacaagttcacgccctacgact
+ggcgcggctatatcgagttcccggccacggtcgatctggccaagctggtccagaccgtct
+acgcccgctcgacccccaggggcctgggcttcctccacttcacccccggcgatctggacg
+agggccgcgtcaccaccgccatctatgacgcccaggaacgcttcaccgaggccgaagccc
+agtcggcgctcgacttcaacggcgagccccgcgacagccgtcaccgcttcttcgacttcg
+actatgtcgacggccgggcggtgaagttcaacctctaccgcgacctcaacgatcgccgct
+tctactgcgaactcgactggtacgaccattccgagtatgacgtcttcgatctggtcgcca
+ccctgcgcgacctgtccgacgccgacaccaaggcctatctcgacgcggtcgccgccgcca
+aggcccagaaaaaggccgacgagttcgccgcgaccgaagcgcgcgccctcctcttggtcc
+gcgccctgaaaaacgtcatgggcggctcggagaccatcccccgcgaggagttctatcgcc
+gctacggcggcaagccgagcgtcatgtacgccgccgacgcccaggatcgcccctatttcg
+actacgcgttcaaccgcgaccacaccattgtcaccgtccggccggacgagggcggcgagg
+ccctctacgcccgcgacgccgtcccggcctgatcccatgagcgacgaacgcggccccggc
+cacaccaagttctacgcctccgaggacggcaagcacgtcatgcgctgcctgaacaacgac
+ccggcctgggtcagtccggtcgtccatgacgaggcgccgctgccggcctggaagatcgcc
+tcgatgttgcaggacgcctataatctcggcaagcgcgagcagcaggagatcatccgccgc
+gcccttggagttcccggacgatgaccgaactgacccttggcgagcgctatgcgcgggagg
+ccctggcggtcgccctgtttggccagcgccgcacgtcctcgtcgatcggcggcgcgccgg
+cctcgctctggcacgagatcgcgccccagcagcgcggaagctggcgcgagcaggccgatc
+gcctcgtcgccgagcaggccggggacgccacggccgtcaccaaggaccagaagcgcaagc
+tggagcgctgggaaggcgaactgctcgccctggccagcggcctggacccggacggctatc
+acgacgccaaggaccaccgcgctgagcgcgatatcgcctcctactaccaggagatgcagc
+cctacgactacaagctctccaacgaggtgctgctgaacgcccactcgcacgccgacgccc
+tcggcctggacctcccggcgtttccggccaactatttctcgtcccaagcggtcgagtcgg
+tcaggacacggcaactgaccgactgggaagcggccatgatggcgatcctacatggcgagg
+ccgagatcaccgcctccaactggtcgagctacaagttcatcgtgccgttccagtatcgct
+tctctgacaagcagatcgtggagatcgccctgaaggcccaatccttcgacggcgtcccgg
+caagatcgccggccgaccgtcgccgctacaaggtggaaaccctctgatgcgccgcttttc
+tatcctgaccctcacggccgccgcgatcgccctgggctgcgtcgccagtctcaccgcctg
+cgccgagcagaccaaggtggacgatcaggtctacgccacgctggagaacggctgcgtcgt
+ccacaagatcgtccgccaggagaagggcagcatgttcatcgaggaggtctacaccaccgt
+ctgcccgaacggggcgacccggacggagtgggagacgaccaagatggtcggcaagacggt
+gaccgtcgaaaagcacgccaccgaaaccccggcgacgcgctaatgaccgccgccctgacc
+ctctcgcgccgcttcacccccaccgacctctccggggcgatgaagatggtcgccccttac
+ggcatcctggccgatccccgcgccgccagcctcgccgcctccatggggttcgcctcgggc
+gacgcccggcacgaagacaccatcctgggcctcaaggtcctgctgttcaagaacgtcccg
+atctggaccgaggcggtgctgaccctggcgcccgagccgccgctgggcgaggtcctgcgc
+tttctgatcctcggccgcgccgcccacacccggttcatcgcccgccgggccgaggcctgg
+ggctggcgcgagcagtacgatccgatgttcgccacgcccgagaactactgcgccctgcgc
+gaccagttccaggccgacttccccgagcgccactttggtgggacccacggactgaacaag
+cagggcctcgccgatctcctggcccgcgacgacgtcttggacgtccagttccacgtcccc
+gccgccccggccgacgccattgtggctgaaattgactgaaggtagacatgaaatccccca
+gcacgcctgaagaaaaggcgctcgaagccgcgcgcaaggcgcggaccgacgctgccgtgg
+cggcgttcacctcgatcgagcgctacgacgcctacgtcaaggctcagttcgacaaggacc
+tgaaggcgggcctgtggggtggctacaactatgccacggcggagccccgcaaacctgtgt
+cgtgggagcaggtgcgcgcctactacgttcgtaatttcctctatcatctcgatcacctct
+gcttgatgttcgggttggagccggccgaaatcatcgcgcgcctggagggagcatgagcgt
+caactaccatatcgagcgcgccgtccgggcgccggagaaaggcttcgtccaggtccgcca
+catcgggcagtgggccaacggccgtttcctctttcagggcgcgaccttccggaccacgcg
+ggcgtggcgcgaccatctccggaccctgacggacgacgagcgcatcgtcagcgagaacgg
+cgtggtcatgagcccgagcgagttctggaacatggtcggtcagaccctggccaacgacac
+cacgctcgactacgctttgaacgtcgcccagggctttgagcaatacagcctcgcgcgcgg
+cttcctggagggtcgcttctggatggacggtcccttcgccttcaccagcaacgagttcca
+ttgatgcccggatttttcgcccgcctgctttaccggatcgccggcgtcgccccgattagc
+acgccgaagaccgccgccctggtcgcggcggtctggtggacgacccggatgaatatcgag
+gcggccgtcgaccccggcacgagcgacgccgaaaagctccaactggccgacgccttccag
+gacgagctttgccggctgatcgacgggcgcctgcggcggatcggcaagcgttccgagggg
+ctgtcgatcgacttcgactacacgcccgacccgctgctggccgaggccttgcgcaaggcc
+ggcgtctcccgcagcgtctggagcgacctgtggctcaacaagacccgcatggtcgtccag
+tcccaccagatcagcgtcaagcccggactggccgggcagcgctacaccatccccatcgga
+gaggtctgatgccctactaccgcaagaagcccgtcgtgatcgaggccatcaccttcgacg
+aactcgtccagcatggccttcaggagaaggacgccggacggggctcagccgtcaagggcg
+ttccctggacgttcctctacaagggccagccgatcacccacgagaacgacgacacctaca
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+cctggcgcgccccgccccggtgcaaggcccgacccgtgaggcggacccggctttcctccc
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+gatcgctccccatggctcgcccctctgacctgctcaacgtcaacgccgcccgcgtcctgg
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+cccggctatggtcgggaggtcgcaaggagacacccgacatgacccgccccggccccgcct
+cgctcctgaccccgcaagcccgcttctcgtcgccgcgcgtcctgatccttccgggcgcgg
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+tgacgctgggcgcggcgctctacctcgccgcccgcgtgttcggtctggtctgaccagacc
+cccgccccgcccccggtcggaccggtcgggggtgtgtcccataatgacacacccccgcca
+cctagtatcttttttgattcggagggacccaaaggccccctacgttaaccatttttggcg
+gcgccccc

Mercurial > repos > cpt > cpt_progressivemauve

comparison cpt_progressivemauve/test-data/karma.fa @ 0:69795939c29b draft