Mercurial > repos > cpt > cpt_sar_finder

annotate test-data/candidate_SAR_stats.tsv @ 2:373c8bca8a82 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit f33bdf952d796c5d7a240b132af3c4cbd102decc
author cpt
date Fri, 05 Jan 2024 05:57:09 +0000
parents 112751823323
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
1 Name Protein Sequence Protein Length SAR Length SAR Start Putative SAR Sequence SAR End ['S%', 'G%', 'A%', 'T%'] % Total N-term Sequence N-term net Charge
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
2 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 17 9 KAALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 29.41), ('A', 23.53), ('T', 5.88)] 58.82 MAGIPKKL 2
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
3 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 16 10 AALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 31.25), ('A', 25.0), ('T', 6.25)] 62.5 MAGIPKKLK 3
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
4 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 9 KAALLAVTIAGGGVG 24 [('S', 0.0), ('G', 26.67), ('A', 26.67), ('T', 6.67)] 60.01 MAGIPKKL 2
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
5 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 10 AALLAVTIAGGGVGG 25 [('S', 0.0), ('G', 33.33), ('A', 26.67), ('T', 6.67)] 66.67 MAGIPKKLK 3
112751823323 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
6 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 11 ALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 33.33), ('A', 20.0), ('T', 6.67)] 60.0 MAGIPKKLKA 3