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comparison test-data/candidate_SAR_stats.tsv @ 1:112751823323 draft

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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:52:57 +0000
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0:9f62910edcc9 1:112751823323
1 Name Protein Sequence Protein Length SAR Length SAR Start Putative SAR Sequence SAR End ['S%', 'G%', 'A%', 'T%'] % Total N-term Sequence N-term net Charge
2 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 17 9 KAALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 29.41), ('A', 23.53), ('T', 5.88)] 58.82 MAGIPKKL 2
3 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 16 10 AALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 31.25), ('A', 25.0), ('T', 6.25)] 62.5 MAGIPKKLK 3
4 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 9 KAALLAVTIAGGGVG 24 [('S', 0.0), ('G', 26.67), ('A', 26.67), ('T', 6.67)] 60.01 MAGIPKKL 2
5 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 10 AALLAVTIAGGGVGG 25 [('S', 0.0), ('G', 33.33), ('A', 26.67), ('T', 6.67)] 66.67 MAGIPKKLK 3
6 SAR-endolysin MAGIPKKLKAALLAVTIAGGGVGGYQEMTRQSLIHLENIAYMPYRDIAGVLTVCVGHTGPDIEMRRYSHAECMALLDSDLKPVYAAIDRLVRVPLTPYQKTALATFIFNTGVTAFSKSTLLKKLNAGDYAGARDQMARWVFAAGHKWKGLMNRREVEMAIWNIRGADDLRQ 171 15 11 ALLAVTIAGGGVGGY 26 [('S', 0.0), ('G', 33.33), ('A', 20.0), ('T', 6.67)] 60.0 MAGIPKKLKA 3