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Added metaphlan2krona
author Dannon Baker <dannonbaker@me.com>
date Tue, 08 Apr 2014 14:16:46 -0400
parents 73f082e9fa2d
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016f6375aadc Initial commit of metaphlan_to_phyloxml converter.
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1 <tool id="meta_to_phylo" name="MetaPhlAn to PhyloXML" version="1.0.0">
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2 <description>converter</description>
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3 <command interpreter="python">metaphlan_to_phyloxml.py $input $output</command>
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4 <inputs>
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5 <param name="input" type="data" format="tabular" label="MetaPhlAn relative abundances"/>
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6 </inputs>
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7 <outputs>
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016f6375aadc Initial commit of metaphlan_to_phyloxml converter.
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8 <data format="xml" name="output" label="${tool.name} on ${on_string}" />
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9 </outputs>
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10 <tests>
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11 </tests>
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12 <help>
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13 This tool converts the results of metagonome profiling performed with MetaPhlAn from tabular to PhyloXML format. The tool accepts as input only the result of rel_ab analysis (profiling in terms of relative abundaces), not reads_map or clade_profiles analysis.
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14 </help>
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016f6375aadc Initial commit of metaphlan_to_phyloxml converter.
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15 </tool>