Mercurial > repos > davidecangelosi > pipe_t
comparison pipe-t.R @ 22:822dc9b96b3e draft
planemo upload for repository https://github.com/igg-molecular-biology-lab/pipe-t.git commit 0632aecba2d189f11add8f4b7e1ce6bca2c564a0
| author | davidecangelosi |
|---|---|
| date | Wed, 29 May 2019 06:13:55 -0400 |
| parents | 1e3113e565db |
| children | 465e643e1ea1 |
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| 21:1e3113e565db | 22:822dc9b96b3e |
|---|---|
| 568 width = 10*300, # 5 x 300 pixels | 568 width = 10*300, # 5 x 300 pixels |
| 569 height = 10*300, | 569 height = 10*300, |
| 570 res = 300, # 300 pixels per inch | 570 res = 300, # 300 pixels per inch |
| 571 pointsize = 8) | 571 pointsize = 8) |
| 572 | 572 |
| 573 plotCtBoxes(xFilter, ylim=c(min(exprs(xFilter), na.rm = TRUE),max(exprs(xFilter), na.rm = TRUE)), cex.lab=3, cex.axis = 2,stratify=NULL, xlab = "Samples", ylab="Ct", mar = c(8,8,8,8), names=as.character(seq(1, ncol(xFilter), 1))) # smaller font size | 573 plotCtBoxes(xFilter, ylim=c(dcCtmin,dcCtmax), cex.lab=3, cex.axis = 2,stratify=NULL, xlab = "Samples", ylab="Ct", mar = c(8,8,8,8), names=as.character(seq(1, ncol(xFilter), 1))) # smaller font size |
| 574 dev.off() | 574 dev.off() |
| 575 | 575 |
| 576 #write.table(exprs(xFilter), file=x, quote=FALSE, row.names=TRUE, col.names=TRUE,sep = "\t") | 576 #write.table(exprs(xFilter), file=x, quote=FALSE, row.names=TRUE, col.names=TRUE,sep = "\t") |
| 577 | 577 |
| 578 #################################################################################################################### | 578 #################################################################################################################### |