diff PKG-INFO @ 7:8d676bbd1f2d

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author davidmurphy
date Mon, 16 Jan 2012 07:03:36 -0500
parents c55bdc2fb9fa
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+Metadata-Version: 1.0
+Name: weblogo
+Version: 3.0
+Summary: WebLogo3 : Sequence Logos Redrawn
+Home-page: http://code.google.com/p/weblogo/
+Author: Gavin Crooks
+Author-email: gec@threeplusone.com
+License: UNKNOWN
+Download-URL: http://weblogo.googlecode.com/svn/dist/weblogo-3.0.tar.gz
+Description: 
+        WebLogo (http://code.google.com/p/weblogo/) is a tool for creating sequence
+        logos from biological sequence alignments.  It can be run on the command line,
+        as a standalone webserver, as a CGI webapp, or as a python library.
+        
+        The main WebLogo webserver is located at http://bespoke.lbl.gov/weblogo/
+        
+        Please consult the manual for installation instructions and more information:
+        (Also located in the weblogolib/htdocs subdirectory.)
+        
+        http://bespoke.lbl.gov/weblogo/manual.html
+        
+        For help on the command line interface run
+        ./weblogo --help
+        
+        To build a simple logo run
+        ./weblogo  < cap.fa > logo0.eps
+        
+        To run as a standalone webserver at localhost:8080
+        ./weblogo --server
+        
+        To create a logo in python code:
+        >>> from weblogolib import *
+        >>> fin = open('cap.fa')
+        >>> seqs = read_seq_data(fin)
+        >>> data = LogoData.from_seqs(seqs)
+        >>> options = LogoOptions()
+        >>> options.title = "A Logo Title"
+        >>> format = LogoFormat(data, options)
+        >>> fout = open('cap.eps', 'w')
+        >>> eps_formatter( data, format, fout)
+        
+        
+        -- Distribution and Modification --
+        This package is distributed under the new BSD Open Source License.
+        Please see the LICENSE.txt file for details on copyright and licensing.
+        The WebLogo source code can be downloaded from
+        http://code.google.com/p/weblogo/
+        
+        WebLogo requires Python 2.3, 2.4 or 2.5, the corebio python toolkit for
+        computational biology (http://code.google.com/p/corebio), and the python
+        array package 'numpy' (http://www.scipy.org/Download)
+        
+Platform: UNKNOWN
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: BSD License
+Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
+Classifier: Programming Language :: Python
+Classifier: Natural Language :: English
+Classifier: Operating System :: OS Independent
+Classifier: Topic :: Software Development :: Libraries
+Classifier: Topic :: Software Development :: Libraries :: Python Modules