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./codonlogo --version < baseline.txt > output.eps
display output.eps
./codonlogo --help < baseline.txt > output.eps
display output.eps
./codonlogo -f baseline.txt > output.eps
display output.eps
./codonlogo -o output.eps < baseline.txt 
display output.eps
./codonlogo -F  eps  < baseline.txt > output.eps
display output.eps
./codonlogo -F png < baseline.txt > output.png
display output.png
./codonlogo -F png_print  < baseline.txt > output.png
display output.png
./codonlogo -F pdf  < baseline.txt > output.pdf
display output.pdf
./codonlogo -F jpeg  < baseline.txt > output.eps
display output.jpeg
./codonlogo -F txt < baseline.txt > output.eps
kate output.txt
./codonlogo -m 1  < baseline.txt > output.eps
display output.eps
./codonlogo -m 4 < baseline.txt > output.eps
display output.eps
./codonlogo -T True < baseline.txt > output.eps
display output.eps
./codonlogo -T False < baseline.txt > output.eps
display output.eps
./codonlogo -U 'bits'  < baseline.txt > output.eps
display output.eps
./codonlogo -U 'nats' < baseline.txt > output.eps
display output.eps
./codonlogo -U 'digits' < baseline.txt > output.eps
display output.eps
./codonlogo -U 'kT' < baseline.txt > output.eps
display output.eps
./codonlogo -U 'kJ/mol' < baseline.txt > output.eps
display output.eps
./codonlogo -U 'kcal/mol' < baseline.txt > output.eps
display output.eps
./codonlogo -U 'probability'  < baseline.txt > output.eps
display output.eps
./codonlogo --weight 32 < baseline.txt > output.eps
display output.eps
./codonlogo -i 2 < baseline.txt > output.eps
display output.eps
./codonlogo -l 2 < baseline.txt > output.eps
display output.eps
./codonlogo -u 4 < baseline.txt > output.eps
display output.eps
./codonlogo -n 2 < baseline.txt > output.eps
display output.eps
./codonlogo -t "Testing" < baseline.txt > output.eps
display output.eps
./codonlogo --label "WHeeeeeee" < baseline.txt > output.eps
display output.eps
./codonlogo -X True < baseline.txt > output.eps
display output.eps
./codonlogo -X False < baseline.txt > output.eps
display output.eps
./codonlogo -x "Hello" < baseline.txt > output.eps
display output.eps
./codonlogo -S 7 < baseline.txt > output.eps
display output.eps
./codonlogo -Y True < baseline.txt > output.eps
display output.eps
./codonlogo -Y False < baseline.txt > output.eps
display output.eps
./codonlogo -y "World" < baseline.txt > output.eps
display output.eps
./codonlogo -E True < baseline.txt > output.eps
display output.eps
./codonlogo --fineprint "Testing" < baseline.txt > output.eps
display output.eps
./codonlogo --ticmarks 3 < baseline.txt > output.eps
display output.eps
./codonlogo --errorbars False < baseline.txt > output.eps
display output.eps
./codonlogo -W 40 < baseline.txt > output.eps
display output.eps
./codonlogo -H 200 < baseline.txt > output.eps
display output.eps
./codonlogo --box True < baseline.txt > output.eps
display output.eps
./codonlogo --box False < baseline.txt > output.eps
display output.eps
./codonlogo --resolution 1200 < baseline.txt > output.eps
display output.eps
./codonlogo --scale-width YES < baseline.txt > output.eps
display output.eps
./codonlogo --scale-width NO < baseline.txt > output.eps
display output.eps
./codonlogo --debug True < baseline.txt > output.eps
display output.eps
./codonlogo --debug False < baseline.txt > output.eps
display output.eps