|
0
|
1
|
|
|
2 ./codonlogo --version < baseline.txt > output.eps
|
|
|
3 display output.eps
|
|
|
4 ./codonlogo --help < baseline.txt > output.eps
|
|
|
5 display output.eps
|
|
|
6 ./codonlogo -f baseline.txt > output.eps
|
|
|
7 display output.eps
|
|
|
8 ./codonlogo -o output.eps < baseline.txt
|
|
|
9 display output.eps
|
|
|
10 ./codonlogo -F eps < baseline.txt > output.eps
|
|
|
11 display output.eps
|
|
|
12 ./codonlogo -F png < baseline.txt > output.png
|
|
|
13 display output.png
|
|
|
14 ./codonlogo -F png_print < baseline.txt > output.png
|
|
|
15 display output.png
|
|
|
16 ./codonlogo -F pdf < baseline.txt > output.pdf
|
|
|
17 display output.pdf
|
|
|
18 ./codonlogo -F jpeg < baseline.txt > output.eps
|
|
|
19 display output.jpeg
|
|
|
20 ./codonlogo -F txt < baseline.txt > output.eps
|
|
|
21 kate output.txt
|
|
|
22 ./codonlogo -m 1 < baseline.txt > output.eps
|
|
|
23 display output.eps
|
|
|
24 ./codonlogo -m 4 < baseline.txt > output.eps
|
|
|
25 display output.eps
|
|
|
26 ./codonlogo -T True < baseline.txt > output.eps
|
|
|
27 display output.eps
|
|
|
28 ./codonlogo -T False < baseline.txt > output.eps
|
|
|
29 display output.eps
|
|
|
30 ./codonlogo -U 'bits' < baseline.txt > output.eps
|
|
|
31 display output.eps
|
|
|
32 ./codonlogo -U 'nats' < baseline.txt > output.eps
|
|
|
33 display output.eps
|
|
|
34 ./codonlogo -U 'digits' < baseline.txt > output.eps
|
|
|
35 display output.eps
|
|
|
36 ./codonlogo -U 'kT' < baseline.txt > output.eps
|
|
|
37 display output.eps
|
|
|
38 ./codonlogo -U 'kJ/mol' < baseline.txt > output.eps
|
|
|
39 display output.eps
|
|
|
40 ./codonlogo -U 'kcal/mol' < baseline.txt > output.eps
|
|
|
41 display output.eps
|
|
|
42 ./codonlogo -U 'probability' < baseline.txt > output.eps
|
|
|
43 display output.eps
|
|
|
44 ./codonlogo --weight 32 < baseline.txt > output.eps
|
|
|
45 display output.eps
|
|
|
46 ./codonlogo -i 2 < baseline.txt > output.eps
|
|
|
47 display output.eps
|
|
|
48 ./codonlogo -l 2 < baseline.txt > output.eps
|
|
|
49 display output.eps
|
|
|
50 ./codonlogo -u 4 < baseline.txt > output.eps
|
|
|
51 display output.eps
|
|
|
52 ./codonlogo -n 2 < baseline.txt > output.eps
|
|
|
53 display output.eps
|
|
|
54 ./codonlogo -t "Testing" < baseline.txt > output.eps
|
|
|
55 display output.eps
|
|
|
56 ./codonlogo --label "WHeeeeeee" < baseline.txt > output.eps
|
|
|
57 display output.eps
|
|
|
58 ./codonlogo -X True < baseline.txt > output.eps
|
|
|
59 display output.eps
|
|
|
60 ./codonlogo -X False < baseline.txt > output.eps
|
|
|
61 display output.eps
|
|
|
62 ./codonlogo -x "Hello" < baseline.txt > output.eps
|
|
|
63 display output.eps
|
|
|
64 ./codonlogo -S 7 < baseline.txt > output.eps
|
|
|
65 display output.eps
|
|
|
66 ./codonlogo -Y True < baseline.txt > output.eps
|
|
|
67 display output.eps
|
|
|
68 ./codonlogo -Y False < baseline.txt > output.eps
|
|
|
69 display output.eps
|
|
|
70 ./codonlogo -y "World" < baseline.txt > output.eps
|
|
|
71 display output.eps
|
|
|
72 ./codonlogo -E True < baseline.txt > output.eps
|
|
|
73 display output.eps
|
|
|
74 ./codonlogo --fineprint "Testing" < baseline.txt > output.eps
|
|
|
75 display output.eps
|
|
|
76 ./codonlogo --ticmarks 3 < baseline.txt > output.eps
|
|
|
77 display output.eps
|
|
|
78 ./codonlogo --errorbars False < baseline.txt > output.eps
|
|
|
79 display output.eps
|
|
|
80 ./codonlogo -W 40 < baseline.txt > output.eps
|
|
|
81 display output.eps
|
|
|
82 ./codonlogo -H 200 < baseline.txt > output.eps
|
|
|
83 display output.eps
|
|
|
84 ./codonlogo --box True < baseline.txt > output.eps
|
|
|
85 display output.eps
|
|
|
86 ./codonlogo --box False < baseline.txt > output.eps
|
|
|
87 display output.eps
|
|
|
88 ./codonlogo --resolution 1200 < baseline.txt > output.eps
|
|
|
89 display output.eps
|
|
|
90 ./codonlogo --scale-width YES < baseline.txt > output.eps
|
|
|
91 display output.eps
|
|
|
92 ./codonlogo --scale-width NO < baseline.txt > output.eps
|
|
|
93 display output.eps
|
|
|
94 ./codonlogo --debug True < baseline.txt > output.eps
|
|
|
95 display output.eps
|
|
|
96 ./codonlogo --debug False < baseline.txt > output.eps
|
|
|
97 display output.eps
|
