|
27
|
1 <html xmlns:v="urn:schemas-microsoft-com:vml"
|
|
|
2 xmlns:o="urn:schemas-microsoft-com:office:office"
|
|
|
3 xmlns:w="urn:schemas-microsoft-com:office:word"
|
|
|
4 xmlns:m="http://schemas.microsoft.com/office/2004/12/omml"
|
|
|
5 xmlns="http://www.w3.org/TR/REC-html40">
|
|
18
|
6
|
|
|
7 <head>
|
|
|
8 <meta http-equiv=Content-Type content="text/html; charset=windows-1252">
|
|
27
|
9 <meta name=ProgId content=Word.Document>
|
|
|
10 <meta name=Generator content="Microsoft Word 14">
|
|
|
11 <meta name=Originator content="Microsoft Word 14">
|
|
|
12 <link rel=File-List href="Junction%20analysis%20tab_files/filelist.xml">
|
|
|
13 <link rel=themeData href="Junction%20analysis%20tab_files/themedata.thmx">
|
|
18
|
14 <style>
|
|
|
15 <!--
|
|
|
16 /* Font Definitions */
|
|
|
17 @font-face
|
|
|
18 {font-family:Calibri;
|
|
27
|
19 panose-1:2 15 5 2 2 2 4 3 2 4;
|
|
|
20 mso-font-charset:0;
|
|
|
21 mso-generic-font-family:swiss;
|
|
|
22 mso-font-pitch:variable;
|
|
|
23 mso-font-signature:-536870145 1073786111 1 0 415 0;}
|
|
18
|
24 /* Style Definitions */
|
|
|
25 p.MsoNormal, li.MsoNormal, div.MsoNormal
|
|
27
|
26 {mso-style-unhide:no;
|
|
|
27 mso-style-qformat:yes;
|
|
|
28 mso-style-parent:"";
|
|
|
29 margin-top:0in;
|
|
18
|
30 margin-right:0in;
|
|
|
31 margin-bottom:10.0pt;
|
|
|
32 margin-left:0in;
|
|
|
33 line-height:115%;
|
|
27
|
34 mso-pagination:widow-orphan;
|
|
18
|
35 font-size:11.0pt;
|
|
27
|
36 font-family:"Calibri","sans-serif";
|
|
|
37 mso-fareast-font-family:"Times New Roman";
|
|
|
38 mso-fareast-theme-font:minor-fareast;
|
|
|
39 mso-bidi-font-family:"Times New Roman";}
|
|
18
|
40 p.MsoNoSpacing, li.MsoNoSpacing, div.MsoNoSpacing
|
|
27
|
41 {mso-style-priority:1;
|
|
|
42 mso-style-unhide:no;
|
|
|
43 mso-style-qformat:yes;
|
|
|
44 margin:0in;
|
|
18
|
45 margin-bottom:.0001pt;
|
|
27
|
46 mso-pagination:widow-orphan;
|
|
18
|
47 font-size:11.0pt;
|
|
27
|
48 font-family:"Calibri","sans-serif";
|
|
|
49 mso-fareast-font-family:"Times New Roman";
|
|
|
50 mso-fareast-theme-font:minor-fareast;
|
|
|
51 mso-bidi-font-family:"Times New Roman";}
|
|
|
52 p.msochpdefault, li.msochpdefault, div.msochpdefault
|
|
|
53 {mso-style-name:msochpdefault;
|
|
|
54 mso-style-unhide:no;
|
|
|
55 mso-margin-top-alt:auto;
|
|
|
56 margin-right:0in;
|
|
|
57 mso-margin-bottom-alt:auto;
|
|
|
58 margin-left:0in;
|
|
|
59 mso-pagination:widow-orphan;
|
|
|
60 font-size:12.0pt;
|
|
|
61 font-family:"Calibri","sans-serif";
|
|
|
62 mso-fareast-font-family:"Times New Roman";
|
|
|
63 mso-fareast-theme-font:minor-fareast;
|
|
|
64 mso-bidi-font-family:"Times New Roman";}
|
|
|
65 p.msopapdefault, li.msopapdefault, div.msopapdefault
|
|
|
66 {mso-style-name:msopapdefault;
|
|
|
67 mso-style-unhide:no;
|
|
|
68 mso-margin-top-alt:auto;
|
|
|
69 margin-right:0in;
|
|
|
70 margin-bottom:10.0pt;
|
|
|
71 margin-left:0in;
|
|
|
72 line-height:115%;
|
|
|
73 mso-pagination:widow-orphan;
|
|
|
74 font-size:12.0pt;
|
|
|
75 font-family:"Times New Roman","serif";
|
|
|
76 mso-fareast-font-family:"Times New Roman";
|
|
|
77 mso-fareast-theme-font:minor-fareast;}
|
|
|
78 span.GramE
|
|
|
79 {mso-style-name:"";
|
|
|
80 mso-gram-e:yes;}
|
|
18
|
81 .MsoChpDefault
|
|
27
|
82 {mso-style-type:export-only;
|
|
|
83 mso-default-props:yes;
|
|
|
84 font-size:10.0pt;
|
|
|
85 mso-ansi-font-size:10.0pt;
|
|
|
86 mso-bidi-font-size:10.0pt;
|
|
|
87 font-family:"Calibri","sans-serif";
|
|
|
88 mso-ascii-font-family:Calibri;
|
|
|
89 mso-hansi-font-family:Calibri;}
|
|
18
|
90 .MsoPapDefault
|
|
27
|
91 {mso-style-type:export-only;
|
|
|
92 margin-bottom:10.0pt;
|
|
18
|
93 line-height:115%;}
|
|
|
94 @page WordSection1
|
|
|
95 {size:8.5in 11.0in;
|
|
27
|
96 margin:1.0in 1.0in 1.0in 1.0in;
|
|
|
97 mso-header-margin:.5in;
|
|
|
98 mso-footer-margin:.5in;
|
|
|
99 mso-paper-source:0;}
|
|
18
|
100 div.WordSection1
|
|
|
101 {page:WordSection1;}
|
|
|
102 -->
|
|
|
103 </style>
|
|
27
|
104 <!--[if gte mso 10]>
|
|
|
105 <style>
|
|
|
106 /* Style Definitions */
|
|
|
107 table.MsoNormalTable
|
|
|
108 {mso-style-name:"Table Normal";
|
|
|
109 mso-tstyle-rowband-size:0;
|
|
|
110 mso-tstyle-colband-size:0;
|
|
|
111 mso-style-noshow:yes;
|
|
|
112 mso-style-priority:99;
|
|
|
113 mso-style-parent:"";
|
|
|
114 mso-padding-alt:0in 5.4pt 0in 5.4pt;
|
|
|
115 mso-para-margin-top:0in;
|
|
|
116 mso-para-margin-right:0in;
|
|
|
117 mso-para-margin-bottom:10.0pt;
|
|
|
118 mso-para-margin-left:0in;
|
|
|
119 line-height:115%;
|
|
|
120 mso-pagination:widow-orphan;
|
|
|
121 font-size:10.0pt;
|
|
|
122 font-family:"Calibri","sans-serif";}
|
|
|
123 </style>
|
|
|
124 <![endif]--><!--[if gte mso 9]><xml>
|
|
|
125 <o:shapedefaults v:ext="edit" spidmax="1026"/>
|
|
|
126 </xml><![endif]--><!--[if gte mso 9]><xml>
|
|
|
127 <o:shapelayout v:ext="edit">
|
|
|
128 <o:idmap v:ext="edit" data="1"/>
|
|
|
129 </o:shapelayout></xml><![endif]-->
|
|
18
|
130 </head>
|
|
|
131
|
|
27
|
132 <body lang=EN-US style='tab-interval:.5in'>
|
|
18
|
133
|
|
|
134 <div class=WordSection1>
|
|
|
135
|
|
27
|
136 <p class=MsoNormal style='text-align:justify'><b><u><span style='font-size:
|
|
|
137 12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Junction
|
|
|
138 analysis tab </span></u></b></p>
|
|
18
|
139
|
|
27
|
140 <p class=MsoNormal style='text-align:justify'><b><span style='font-size:12.0pt;
|
|
|
141 line-height:115%;font-family:"Times New Roman","serif"'>Tables:</span></b></p>
|
|
|
142
|
|
|
143 <p class=MsoNormal style='text-align:justify'><span style='font-size:12.0pt;
|
|
|
144 line-height:115%;font-family:"Times New Roman","serif"'>The unique
|
|
|
145 rearrangements are separated in sequences that contain <span class=GramE>both a</span>
|
|
|
146 V, D and J gene and sequences that contain only a V and J gene.</span></p>
|
|
18
|
147
|
|
27
|
148 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
|
|
|
149 justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
|
|
|
150 font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive mean
|
|
|
151 tables<o:p></o:p></span></u></p>
|
|
18
|
152
|
|
27
|
153 <p class=MsoNormal style='text-align:justify'><span class=GramE><span
|
|
|
154 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
|
|
|
155 for each donor the number of productive sequences and the mean number of
|
|
|
156 deletions, N-nucleotides and P-nucleotides.</span></span><span
|
|
|
157 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
|
|
|
158 For explanation about the different deletions and N and P nucleotides see
|
|
|
159 figure above. </span></p>
|
|
|
160
|
|
|
161 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
|
|
|
162 justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
|
|
|
163 font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Unproductive
|
|
|
164 mean table<o:p></o:p></span></u></p>
|
|
18
|
165
|
|
27
|
166 <p class=MsoNormal style='text-align:justify'><span class=GramE><span
|
|
|
167 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
|
|
|
168 for each donor the number of unproductive sequences and the mean number of
|
|
|
169 deletions, N-nucleotides and P-nucleotides.</span></span><span
|
|
|
170 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
|
|
|
171 For explanation about the different deletions and N and P nucleotides see
|
|
|
172 figure above. </span></p>
|
|
18
|
173
|
|
27
|
174 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
|
|
|
175 justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
|
|
|
176 font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive
|
|
|
177 median table<o:p></o:p></span></u></p>
|
|
18
|
178
|
|
27
|
179 <p class=MsoNormal style='text-align:justify'><span class=GramE><span
|
|
|
180 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
|
|
|
181 for each donor the number of productive sequences and the median number of
|
|
|
182 deletions, N-nucleotides and P-nucleotides.</span></span><span
|
|
|
183 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
|
|
|
184 For explanation about the different deletions and N and P nucleotides see
|
|
|
185 figure above. </span></p>
|
|
18
|
186
|
|
27
|
187 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
|
|
|
188 justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
|
|
|
189 font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Unproductive
|
|
|
190 median table<o:p></o:p></span></u></p>
|
|
18
|
191
|
|
27
|
192 <p class=MsoNormal style='text-align:justify'><span class=GramE><span
|
|
|
193 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
|
|
|
194 for each donor the number of unproductive sequences and the median number of
|
|
|
195 deletions, N-nucleotides and P-nucleotides.</span></span><span
|
|
|
196 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
|
|
|
197 For explanation about the different deletions and N and P nucleotides see
|
|
|
198 figure above. </span></p>
|
|
18
|
199
|
|
|
200 <p class=MsoNormal> </p>
|
|
|
201
|
|
|
202 </div>
|
|
|
203
|
|
|
204 </body>
|
|
|
205
|
|
|
206 </html>
|
