Mercurial > repos > dawe > srf2fastq
comparison srf2fastq/io_lib-1.12.2/progs/scf_info.c @ 0:d901c9f41a6a default tip
Migrated tool version 1.0.1 from old tool shed archive to new tool shed repository
author | dawe |
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date | Tue, 07 Jun 2011 17:48:05 -0400 |
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-1:000000000000 | 0:d901c9f41a6a |
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1 /* | |
2 * Copyright (c) Medical Research Council 1994. All rights reserved. | |
3 * | |
4 * Permission to use, copy, modify and distribute this software and its | |
5 * documentation for any purpose is hereby granted without fee, provided that | |
6 * this copyright and notice appears in all copies. | |
7 * | |
8 * This file was written by James Bonfield, Simon Dear, Rodger Staden, | |
9 * as part of the Staden Package at the MRC Laboratory of Molecular | |
10 * Biology, Hills Road, Cambridge, CB2 2QH, United Kingdom. | |
11 * | |
12 * MRC disclaims all warranties with regard to this software. | |
13 */ | |
14 | |
15 #include <stdio.h> | |
16 #include <io_lib/scf.h> | |
17 | |
18 int main(int argc, char **argv) { | |
19 Scf *scf; | |
20 | |
21 if (argc != 2) { | |
22 fprintf(stderr, "Usage: scf_info scf_filename\n"); | |
23 return 1; | |
24 } | |
25 | |
26 scf = read_scf(argv[1]); | |
27 | |
28 if (scf == NULL) { | |
29 fprintf(stderr, "read_scf failed\n"); | |
30 return 1; | |
31 } | |
32 | |
33 printf("Version_number %.4s\n", scf->header.version); | |
34 printf("Number_of_samples %d\n", scf->header.samples); | |
35 printf("Samples_offset %d\n", scf->header.samples_offset); | |
36 printf("Samples_size %d\n", scf->header.sample_size); | |
37 printf("Number_of_bases %d\n", scf->header.bases); | |
38 printf("Bases_offset %d\n", scf->header.bases_offset); | |
39 printf("Comments_size %d\n", scf->header.comments_size); | |
40 printf("Comments_offset %d\n", scf->header.comments_offset); | |
41 printf("Left_clip %d\n", scf->header.bases_left_clip); | |
42 printf("Right_clip %d\n", scf->header.bases_right_clip); | |
43 printf("Code set %d\n", scf->header.code_set); | |
44 | |
45 scf_deallocate(scf); | |
46 | |
47 return 0; | |
48 } |