Mercurial > repos > dereeper > pangenome_explorer

diff PanExplorer.xml @ 7:2c65d4257fe6 draft

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Uploaded
author dereeper
date Thu, 30 May 2024 12:30:04 +0000
parents 35d71348e81e
children f919ffe96425
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--- a/PanExplorer.xml	Thu May 30 12:12:30 2024 +0000
+++ b/PanExplorer.xml	Thu May 30 12:30:04 2024 +0000
@@ -8,12 +8,13 @@
  <requirement type="package" version="3.697">phylip</requirement>
  <requirement type="package" version="1.7.2">perl-bioperl</requirement>
  -->
-    <requirement type="package" version="2.4.2">singularity</requirement>
+    <requirement type="package" version="1.30">perl-yaml</requirement>
+    <requirement type="package" version="3.8.7">singularity</requirement>
  
  </requirements>
 
     <command><![CDATA[
-module load system/singularity/3.6.0;
+
 export PANEX_PATH=${__tool_directory__};
 
 perl ${__tool_directory__}/Perl/generateConfig.pl '$private_genomes' '$input' config.yaml '$private_genomes_fasta';