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annotate test-data/output.vcf @ 7:d6a7be1b5adb draft

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author dereeper
date Wed, 07 Feb 2018 00:16:59 -0500
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1 ##fileformat=VCFv4.2
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2 ##fileDate=
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3 ##source=PLINKv1.90
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4 ##contig=<ID=1,length=43269459>
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9 ##INFO=<ID=PR,Number=0,Type=Flag,Description="Provisional reference allele, may not be based on real reference genome">
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10 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
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11 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT AZUCENA BULUPANDAK GIZA171 IAC165 KHAODAM M202 MOROBEREKAN NIPPONBARE.D 62667 63-104 ARAGUAIA ARIAS ARROZCEBADA BABER BAGANANASALAO BAKUNGH BENGALYVAKARINA BICOBRANCO BINULAWAN CAIAPO CANAROXA CANELADEFERRO CHALOYOE CHAPHUMA CICIHBETON CIRAD358 CIRAD392 CIRAD394 CIRAD403 CIRAD409 CIRAD488 CNA-7.BO.1.1.33-13-6-1 COLOMBIA1 CT13582-15-5-M CUBA65 CUIABANA CURINCA DAM DANGREY DAVAO DAWASANRED DINORADO DOURADOAGULHA DOURADOPRECOCE ESPERANZA FOHISOMOTRA GANIGI GEMJYAJYANAM GOGO GOGOLEMPUK GOGOLEMPAK GOMPA2 GRAZI GUARANI GUNDILKUNING HAWMOM HD1-4 IAC25 IAC47 IDSA77 IGUAPECATETO INDANE IR60080-46A IR63380-16 IR63372-08 IR65907-188-1-B IR66421-096-2-1-1 IR68704-145-1-1-B IR71525-19-1-1 IRAT104 IRAT109 IRAT112 IRAT13 IRAT144 IRAT170 IRAT177 IRAT2 IRAT212 IRAT216 IRAT234 IRAT257 IRAT335 IRAT362 IRAT364 IRAT366 IRAT380 JAOHAW JIMBRUKJOLOWORO JUMALI JUMULA2 KAKANI2 KANIRANGA KARASUKARASURANKASU KEDAYAN KENDINGA5H KETANKONIR KETANLUMBU KETANMENAH KHAOKAPXANG KINANDANGPATONG KOMOJAMANITRA KU115 KUROKA LAMBAYQUE1 LUDAN MAHAE MAINTIMOLOTSY1226 MALAGKITPIRURUTONG MANANELATRA520 MANDRIRAVINA3512 MARAVILHA MITSANGANAHIJERY MOLOK NABESHI NEPHOAVANG NHTA10 NHTA5 NPE253 NPE826 ORYZICASABANA6 OS4 OS6 P5589-1-1-3-P PACHOLINHA PADIBOENAR PADIKASALLE PALAWAN PATEBLANCMAN1 PCT11.0.0.2.BO.1.55-1-3-1 PCT4.SA.4.1.1076-2-4-1-5 PEHPINUO POENOETHITAM PULULAPA RATHAL REKETMAUN RT1031-69 SENG SPEAKER TANDUI TREMBESE TRESMESES TSIPALA89 VARYLAVA90 VARYLAVADEBETAFO VARYMADINIKA3566 VARYMALADY VARYSOMOTRASIHANAKA WAB56-125 WAB56-50 WAB706-3-4-K4-KB-1 YANCAOUSSA YANGKUMRED YUNLU7 IR47686-09-01-B-1 IR53236-275-1 IR65261-19-1-B IR65907-206-4-B IR66421-105-1-1 IR71524-44-1-1 VIETNAM1 VIETNAM3 IR47684-05-1-B PRIMAVERA CHUAN3 CHUAN4 EARLYMUTANTIAC165
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d6a7be1b5adb Uploaded
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parents:
diff changeset
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d6a7be1b5adb Uploaded
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parents:
diff changeset
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d6a7be1b5adb Uploaded
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parents:
diff changeset
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parents:
diff changeset
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
dereeper
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diff changeset
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
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d6a7be1b5adb Uploaded
dereeper
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diff changeset
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d6a7be1b5adb Uploaded
dereeper
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diff changeset
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d6a7be1b5adb Uploaded
dereeper
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diff changeset
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d6a7be1b5adb Uploaded
dereeper
parents:
diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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d6a7be1b5adb Uploaded
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diff changeset
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